Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2299
         (803 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    35   0.40 
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    32   2.1  
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    31   4.9  
AL450303-2|CAH71663.1|  311|Homo sapiens olfactory receptor, fam...    30   8.5  
AB065953-1|BAC06166.1|  311|Homo sapiens seven transmembrane hel...    30   8.5  

>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 34.7 bits (76), Expect = 0.40
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
 Frame = +1

Query: 181 LYCCNHLYK*ILTYNICDRYT*---NIKKIIQLI*PCRTIQYTCASFHWIVLSIVY**IP 351
           +Y   H+Y  + TY     YT    +I   + +     T  Y CA  H  V + +Y  I 
Sbjct: 47  MYTHKHMY--VYTYIYVYTYTYVCVHIHICVHIYLCMYTHTYMCAHIHMCVYTYIYVYI- 103

Query: 352 T**YVWLFIPIYFNVYC-IYM*LYKCTDMYVLVYGISV 462
              Y  + I ++ N+Y  IY+ +Y C  +Y+ +Y + V
Sbjct: 104 ---YTHIHICVHINMYVSIYVYIYTCIQIYIYMYTLYV 138


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +2

Query: 302 VHHSIG*FYQSYINEYLHNNM--FGCLYQFILMFI-VYICNYISVQICMYWFM 451
           +H  I  +   YI  Y+H  +    C+Y +I M+  VYI  YI + +C+Y +M
Sbjct: 194 IHRCIFIYTYVYICVYIHIYICIHVCVYSYIHMYTYVYIHVYIGIHMCVYSYM 246


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +2

Query: 335 YINEYLHNNMFGCLYQFILMFIVYICNYISVQICMYWFMVFL*RCDVVVFL 487
           YI  Y++  +F  +Y +I ++I YIC YI + I +Y F        + ++L
Sbjct: 32  YIYLYIYFYIFTYIYLYIFIYI-YICLYIYLYIYLYIFTYIYIYLHIFIYL 81


>AL450303-2|CAH71663.1|  311|Homo sapiens olfactory receptor, family
           2, subfamily M, member1-like 1 protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 272 YSLV-GPFNILVHHSIG*FYQSYINEYLHNNMFGCLYQFILMFIVYICNYISVQICMY 442
           +SLV G F++ +  +I      YI + LH  M+  L Q  LM ++ IC  +   I  Y
Sbjct: 28  FSLVLGIFSLALMENISMVLLIYIEKQLHTPMYFLLSQLSLMDLMLICTTLPKMIFSY 85


>AB065953-1|BAC06166.1|  311|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 272 YSLV-GPFNILVHHSIG*FYQSYINEYLHNNMFGCLYQFILMFIVYICNYISVQICMY 442
           +SLV G F++ +  +I      YI + LH  M+  L Q  LM ++ IC  +   I  Y
Sbjct: 28  FSLVLGIFSLALMENISMVLLIYIEKQLHTPMYFLLSQLSLMDLMLICTTLPKMIFSY 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,368,737
Number of Sequences: 237096
Number of extensions: 2337998
Number of successful extensions: 10674
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10669
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)