Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2299
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37092-9|CAA85458.1|  126|Caenorhabditis elegans Hypothetical pr...    32   0.42 
Z92849-14|CAE17857.1|  359|Caenorhabditis elegans Hypothetical p...    30   2.2  
Z78414-4|CAE17982.1|  359|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AF106584-1|AAC78221.1|  360|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    29   5.1  
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine re...    28   6.8  
AF016665-2|AAC71181.1|  662|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z78019-2|CAB01451.1|  347|Caenorhabditis elegans Hypothetical pr...    28   9.0  
U40029-1|AAA81123.3|  360|Caenorhabditis elegans Serpentine rece...    28   9.0  

>Z37092-9|CAA85458.1|  126|Caenorhabditis elegans Hypothetical
           protein F44F4.9 protein.
          Length = 126

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 557 FTCASLLSFIVVNVIDIGLSLGEFIQTINRHKYLLNKPSVH 679
           FT  S L+  V++ +  GLSL  F++     ++ L++P VH
Sbjct: 33  FTLYSTLAIFVISTVIFGLSLYSFLKNRRLRQFKLSEPQVH 73


>Z92849-14|CAE17857.1|  359|Caenorhabditis elegans Hypothetical
           protein H12D21.11 protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +2

Query: 185 IVVIIFTNKS*PIIFVIGIHKILKK*FS*YSLVGPFNILVHHSIG*FYQSYINEYLHNNM 364
           I +I++ +KS  +I   GI+  + K F   S+V  F I++ H I  FY   I+  L+N +
Sbjct: 150 ISMILYLDKSLALI-KCGIYNSVGKTFIYISIV--FKIMLDHFIRIFY---ISNLLYNFL 203

Query: 365 FGCLYQFILMFIVYICN-YISVQICMYW 445
              + Q   ++I+ +C+ ++ V I +++
Sbjct: 204 ISSVIQDRCLYIIQLCSTFLLVFIFIFY 231


>Z78414-4|CAE17982.1|  359|Caenorhabditis elegans Hypothetical
           protein H12D21.11 protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +2

Query: 185 IVVIIFTNKS*PIIFVIGIHKILKK*FS*YSLVGPFNILVHHSIG*FYQSYINEYLHNNM 364
           I +I++ +KS  +I   GI+  + K F   S+V  F I++ H I  FY   I+  L+N +
Sbjct: 150 ISMILYLDKSLALI-KCGIYNSVGKTFIYISIV--FKIMLDHFIRIFY---ISNLLYNFL 203

Query: 365 FGCLYQFILMFIVYICN-YISVQICMYW 445
              + Q   ++I+ +C+ ++ V I +++
Sbjct: 204 ISSVIQDRCLYIIQLCSTFLLVFIFIFY 231


>AF106584-1|AAC78221.1|  360|Caenorhabditis elegans Hypothetical
           protein F54A5.2 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 660 KRYLCRFIVCMNSPKESPISITFTTIKLNNDA 565
           KR+L   I     PKES ++++F  I +N+DA
Sbjct: 109 KRFLLTCIPAAPVPKESQVTVSFGGITINSDA 140


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -2

Query: 247  FMYTYHKYYRSGFICKDD--YNNKDHQMEIYCFITIRF 140
            +M TY   YR  F    D   NN   + EI C +T+RF
Sbjct: 2422 YMQTYRNVYRMAFGVTGDSLVNNPLFESEIMCAMTLRF 2459


>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
           protein F59A6.5 protein.
          Length = 1286

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 624 SPKESPISITFTTIKLNNDAH 562
           SPK+ P S  F  I LNN++H
Sbjct: 24  SPKQKPYSSPFQVIDLNNESH 44


>AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine
           receptor, class v protein21 protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +2

Query: 167 FHLMIFIVVIIFTNKS*PIIFVIGIHKILKK*FS*YSLVGPFNILVHHS 313
           + L+IFI  +        ++FV+ + +     +   S +GPF IL+ ++
Sbjct: 248 YFLLIFITSLCSAGTIRDMVFVVAVRRNFPTAYGTLSFIGPFTILIFNN 296


>AF016665-2|AAC71181.1|  662|Caenorhabditis elegans Hypothetical
           protein C49D10.8 protein.
          Length = 662

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 22/63 (34%), Positives = 31/63 (49%)
 Frame = +2

Query: 218 PIIFVIGIHKILKK*FS*YSLVGPFNILVHHSIG*FYQSYINEYLHNNMFGCLYQFILMF 397
           P I++ G  KI KK  + Y  +   + LV      FY S       NNMF  ++QF++  
Sbjct: 155 PFIYIFGT-KIAKKFHNVYYGILGLSSLV------FYYSSPPTVAFNNMFARVWQFLIGM 207

Query: 398 IVY 406
           IVY
Sbjct: 208 IVY 210


>Z78019-2|CAB01451.1|  347|Caenorhabditis elegans Hypothetical
           protein ZK863.5 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 296 ILVHHSIG*FYQSYINEYLHNNMFGCLYQFILMFIVYICNYI 421
           I +HHS        IN +     F CL+ ++LM I  I  Y+
Sbjct: 158 IQIHHSQYKLQDFVINGHADLREFPCLFSYLLMLIPIIPGYL 199


>U40029-1|AAA81123.3|  360|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 39 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/50 (20%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +2

Query: 293 NILVHHSIG*FYQSY-INEYLHNNMFGCLYQFILMFIVYICNYISVQICM 439
           NI + +S   F+  + +N   +++ +  L+  I + + ++C  +++Q+C+
Sbjct: 2   NIFIGNSSKYFFPVFTLNSAYYSDYYAMLFIIIHILLTFLCCLLTIQVCL 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,144,305
Number of Sequences: 27780
Number of extensions: 406516
Number of successful extensions: 872
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)