Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2298
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    30   0.079
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    25   1.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.2  
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           23   9.1  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           23   9.1  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           23   9.1  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           23   9.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.1  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   9.1  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 29.9 bits (64), Expect = 0.079
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +2

Query: 341 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATL---PSRKERCLTQ 502
           P   R E  + R +  SP L +  TCP+P    C    SR +++   P+R   C T+
Sbjct: 37  PRTRRSEAVMTRSTPSSPRLAQASTCPVP----CSSIWSRPSSMRCAPARTASCSTR 89


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 447 VPVHVPQPYPVEKKGALPSTCPSRQTRPR 533
           V V++PQPYP++     P   P  +  P+
Sbjct: 190 VKVYIPQPYPLQVNVEQPIKIPIYKVIPK 218


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 385 TFPNPTPLSNMSLTQLKRLSRYQFTYRNPTQSKRK 489
           TF   TP+   + T  K    YQ+T R P  S  K
Sbjct: 798 TFTKLTPIWRCATTVRKGRKLYQYTIRLPINSPWK 832


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -3

Query: 591 FDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWVRHLSFRLGRVAVRELV 448
           F +  N   +  R W  Y +G GSVD + +       R+    + EL+
Sbjct: 178 FQYRFNGSVDFNRDWVAYRNGFGSVDGEFWLGLERLHRITAAQIHELL 225


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -3

Query: 591 FDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWVRHLSFRLGRVAVRELV 448
           F +  N   +  R W  Y +G GSVD + +       R+    + EL+
Sbjct: 178 FQYRFNGSVDFNRDWVAYRNGFGSVDGEFWLGLERIHRITAAQIHELL 225


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -3

Query: 591 FDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWVRHLSFRLGRVAVRELV 448
           F +  N   +  R W  Y +G GSVD + +       R+    + EL+
Sbjct: 178 FQYRFNGSVDFNRDWVAYRNGFGSVDGEFWLGLERLHRITAAQIHELL 225


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -3

Query: 591 FDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWVRHLSFRLGRVAVRELV 448
           F +  N   +  R W  Y +G GSVD + +       R+    + EL+
Sbjct: 178 FQYRFNGSVDFNRDWVAYRNGFGSVDGEFWLGLERLHRITAAQIHELL 225


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 423 KGHV*QRGRVGERALSRGRGFSFLPG 346
           KG    RG+VGER     +G    PG
Sbjct: 322 KGQAGDRGQVGERGHKGEKGLPGQPG 347


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 467 LRYVNWYLDNLFNWVRDMFDNGVGLGNV 384
           +R ++ YLD   NW R      VGL NV
Sbjct: 76  VRIIDPYLDLEENWGRGHIKRFVGLKNV 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,821
Number of Sequences: 2352
Number of extensions: 8358
Number of successful extensions: 40
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)