Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2298
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070658-1|AAL48129.1|  270|Drosophila melanogaster RH04334p pro...    45   8e-05
AE014134-2433|AAF53358.2|  270|Drosophila melanogaster CG16885-P...    45   8e-05
AE014134-2432|AAN10857.1|  156|Drosophila melanogaster CG16885-P...    44   3e-04
AY069544-1|AAL39689.1|  328|Drosophila melanogaster LD27203p pro...    40   0.004
AE013599-2451|AAF57876.1|  328|Drosophila melanogaster CG30101-P...    40   0.004
BT021214-1|AAX33362.1|  373|Drosophila melanogaster RH73259p pro...    36   0.069
AE014134-2431|AAF53357.3|  373|Drosophila melanogaster CG16886-P...    36   0.069
BT010220-1|AAQ23538.1|  277|Drosophila melanogaster RH05666p pro...    31   1.1  
AY061007-1|AAL28555.1|  277|Drosophila melanogaster HL02234p pro...    31   1.1  
AE014134-2434|AAF53359.1|  277|Drosophila melanogaster CG16884-P...    31   1.1  
BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p pro...    29   6.0  
AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD2333...    29   6.0  
AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB...    29   6.0  
AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA...    29   6.0  

>AY070658-1|AAL48129.1|  270|Drosophila melanogaster RH04334p
           protein.
          Length = 270

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 23/58 (39%), Positives = 27/58 (46%)
 Frame = +3

Query: 339 IPYPVEKKIXXXXXXXXXXXXXXXXXXXXXXXEIVKVPVHVPQPYPVEKKGALPSTCP 512
           +PYPVEK +                       +IVKVPV VPQPYPVEK   +P   P
Sbjct: 100 VPYPVEKTVTYPVKVPVPQPYPVEKIVHVPVKQIVKVPVEVPQPYPVEKVIRVPVKIP 157


>AE014134-2433|AAF53358.2|  270|Drosophila melanogaster CG16885-PA,
           isoform A protein.
          Length = 270

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 23/58 (39%), Positives = 27/58 (46%)
 Frame = +3

Query: 339 IPYPVEKKIXXXXXXXXXXXXXXXXXXXXXXXEIVKVPVHVPQPYPVEKKGALPSTCP 512
           +PYPVEK +                       +IVKVPV VPQPYPVEK   +P   P
Sbjct: 100 VPYPVEKTVTYPVKVPVPQPYPVEKIVHVPVKQIVKVPVEVPQPYPVEKVIRVPVKIP 157


>AE014134-2432|AAN10857.1|  156|Drosophila melanogaster CG16885-PB,
           isoform B protein.
          Length = 156

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 339 IPYPVEKKIXXXXXXXXXXXXXXXXXXXXXXXEIVKVPVHVPQPYPVEK 485
           +PYPVEK +                       +IVKVPV VPQPYPVEK
Sbjct: 100 VPYPVEKTVTYPVKVPVPQPYPVEKIVHVPVKQIVKVPVEVPQPYPVEK 148


>AY069544-1|AAL39689.1|  328|Drosophila melanogaster LD27203p
           protein.
          Length = 328

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 21/50 (42%), Positives = 23/50 (46%)
 Frame = +3

Query: 339 IPYPVEKKIXXXXXXXXXXXXXXXXXXXXXXXEIVKVPVHVPQPYPVEKK 488
           +PY VEKKI                       E VKVPVHVP+PY V KK
Sbjct: 73  VPYTVEKKIPYEVKVDVPQPYIVEKKVPVHVKEYVKVPVHVPKPYEVIKK 122


>AE013599-2451|AAF57876.1|  328|Drosophila melanogaster CG30101-PA
           protein.
          Length = 328

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 21/50 (42%), Positives = 23/50 (46%)
 Frame = +3

Query: 339 IPYPVEKKIXXXXXXXXXXXXXXXXXXXXXXXEIVKVPVHVPQPYPVEKK 488
           +PY VEKKI                       E VKVPVHVP+PY V KK
Sbjct: 73  VPYTVEKKIPYEVKVDVPQPYIVEKKVPVHVKEYVKVPVHVPKPYEVIKK 122


>BT021214-1|AAX33362.1|  373|Drosophila melanogaster RH73259p
           protein.
          Length = 373

 Score = 35.5 bits (78), Expect = 0.069
 Identities = 20/51 (39%), Positives = 22/51 (43%)
 Frame = +3

Query: 348 PVEKKIXXXXXXXXXXXXXXXXXXXXXXXEIVKVPVHVPQPYPVEKKGALP 500
           PVEK I                       EIVKVP  VP PYPVEK+  +P
Sbjct: 100 PVEKHIHVPVKVKVPKPYPVIKHIPYEVKEIVKVPYEVPAPYPVEKQVHVP 150



 Score = 32.7 bits (71), Expect = 0.48
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +3

Query: 441 VKVPVHVPQPYPVEKKGALP 500
           V V VHVP PYPVEKK  +P
Sbjct: 159 VPVKVHVPAPYPVEKKVHVP 178



 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +3

Query: 441 VKVPVHVPQPYPVEK 485
           V V VHVP PYPVEK
Sbjct: 177 VPVKVHVPAPYPVEK 191


>AE014134-2431|AAF53357.3|  373|Drosophila melanogaster CG16886-PA
           protein.
          Length = 373

 Score = 35.5 bits (78), Expect = 0.069
 Identities = 20/51 (39%), Positives = 22/51 (43%)
 Frame = +3

Query: 348 PVEKKIXXXXXXXXXXXXXXXXXXXXXXXEIVKVPVHVPQPYPVEKKGALP 500
           PVEK I                       EIVKVP  VP PYPVEK+  +P
Sbjct: 100 PVEKHIHVPVKVKVPKPYPVIKHIPYEVKEIVKVPYEVPAPYPVEKQVHVP 150



 Score = 32.7 bits (71), Expect = 0.48
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +3

Query: 441 VKVPVHVPQPYPVEKKGALP 500
           V V VHVP PYPVEKK  +P
Sbjct: 159 VPVKVHVPAPYPVEKKVHVP 178



 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +3

Query: 441 VKVPVHVPQPYPVEK 485
           V V VHVP PYPVEK
Sbjct: 177 VPVKVHVPAPYPVEK 191


>BT010220-1|AAQ23538.1|  277|Drosophila melanogaster RH05666p
           protein.
          Length = 277

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +3

Query: 342 PYPV--EKKIXXXXXXXXXXXXXXXXXXXXXXXEIVKVPVHVPQPYPVEKKGALPSTCP 512
           PYPV  EK++                       E VKVPV VPQPY V +   +P   P
Sbjct: 133 PYPVVHEKRVPVEVKVPVPQPYEVIRKVPVTVKEYVKVPVPVPQPYEVIRHEKVPVHVP 191


>AY061007-1|AAL28555.1|  277|Drosophila melanogaster HL02234p
           protein.
          Length = 277

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +3

Query: 342 PYPV--EKKIXXXXXXXXXXXXXXXXXXXXXXXEIVKVPVHVPQPYPVEKKGALPSTCP 512
           PYPV  EK++                       E VKVPV VPQPY V +   +P   P
Sbjct: 133 PYPVVHEKRVPVEVKVPVPQPYEVIRKVPVTVKEYVKVPVPVPQPYEVIRHEKVPVHVP 191


>AE014134-2434|AAF53359.1|  277|Drosophila melanogaster CG16884-PA
           protein.
          Length = 277

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +3

Query: 342 PYPV--EKKIXXXXXXXXXXXXXXXXXXXXXXXEIVKVPVHVPQPYPVEKKGALPSTCP 512
           PYPV  EK++                       E VKVPV VPQPY V +   +P   P
Sbjct: 133 PYPVVHEKRVPVEVKVPVPQPYEVIRKVPVTVKEYVKVPVPVPQPYEVIRHEKVPVHVP 191


>BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p
           protein.
          Length = 1341

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 326 RRKAHPLPGRKENPLPRESARSPTLPRCQ 412
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323


>AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD23336
           protein.
          Length = 1239

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 326 RRKAHPLPGRKENPLPRESARSPTLPRCQ 412
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 193 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 221


>AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB,
           isoform B protein.
          Length = 1296

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 326 RRKAHPLPGRKENPLPRESARSPTLPRCQ 412
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 250 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 278


>AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA,
           isoform A protein.
          Length = 1341

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 326 RRKAHPLPGRKENPLPRESARSPTLPRCQ 412
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,911,596
Number of Sequences: 53049
Number of extensions: 416891
Number of successful extensions: 1632
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)