Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2293
         (783 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118362-1|AAM48391.1|  834|Drosophila melanogaster RE07883p pro...    30   4.1  
AE013599-2535|AAF57814.1|  858|Drosophila melanogaster CG4966-PA...    30   4.1  
AE013599-2533|AAG22260.1|  834|Drosophila melanogaster CG4966-PB...    30   4.1  

>AY118362-1|AAM48391.1|  834|Drosophila melanogaster RE07883p
           protein.
          Length = 834

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 600 GKNVLKTFGRFKTKIGTSRN 659
           GK VLK FGRF   IGT RN
Sbjct: 70  GKFVLKEFGRFILAIGTDRN 89


>AE013599-2535|AAF57814.1|  858|Drosophila melanogaster CG4966-PA,
           isoform A protein.
          Length = 858

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 600 GKNVLKTFGRFKTKIGTSRN 659
           GK VLK FGRF   IGT RN
Sbjct: 94  GKFVLKEFGRFILAIGTDRN 113


>AE013599-2533|AAG22260.1|  834|Drosophila melanogaster CG4966-PB,
           isoform B protein.
          Length = 834

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 600 GKNVLKTFGRFKTKIGTSRN 659
           GK VLK FGRF   IGT RN
Sbjct: 70  GKFVLKEFGRFILAIGTDRN 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,944,638
Number of Sequences: 53049
Number of extensions: 658331
Number of successful extensions: 1167
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)