Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2284
(763 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 32 2.6
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 32 2.6
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 32 2.6
AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein pr... 32 2.6
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 32 2.6
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 32 2.6
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 32 2.6
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 32 2.6
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 32 2.6
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 32 2.6
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 490 GHSVAKPQPSGLI-PCSPFCPGEAGKVSGTAIILXXXXXXXXXRGGARYPIRPIVSR 657
GH+ P P L+ P P CPG+A +V+ +L R GA P P+ SR
Sbjct: 770 GHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE-PPAPLTSR 825
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 490 GHSVAKPQPSGLI-PCSPFCPGEAGKVSGTAIILXXXXXXXXXRGGARYPIRPIVSR 657
GH+ P P L+ P P CPG+A +V+ +L R GA P P+ SR
Sbjct: 738 GHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE-PPAPLTSR 793
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 490 GHSVAKPQPSGLI-PCSPFCPGEAGKVSGTAIILXXXXXXXXXRGGARYPIRPIVSR 657
GH+ P P L+ P P CPG+A +V+ +L R GA P P+ SR
Sbjct: 730 GHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE-PPAPLTSR 785
>AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein
protein.
Length = 294
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 490 GHSVAKPQPSGLI-PCSPFCPGEAGKVSGTAIILXXXXXXXXXRGGARYPIRPIVSR 657
GH+ P P L+ P P CPG+A +V+ +L R GA P P+ SR
Sbjct: 102 GHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE-PPAPLTSR 157
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 490 GHSVAKPQPSGLI-PCSPFCPGEAGKVSGTAIILXXXXXXXXXRGGARYPIRPIVSR 657
GH+ P P L+ P P CPG+A +V+ +L R GA P P+ SR
Sbjct: 770 GHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE-PPAPLTSR 825
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 490 GHSVAKPQPSGLI-PCSPFCPGEAGKVSGTAIILXXXXXXXXXRGGARYPIRPIVSR 657
GH+ P P L+ P P CPG+A +V+ +L R GA P P+ SR
Sbjct: 730 GHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE-PPAPLTSR 785
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 490 GHSVAKPQPSGLI-PCSPFCPGEAGKVSGTAIILXXXXXXXXXRGGARYPIRPIVSR 657
GH+ P P L+ P P CPG+A +V+ +L R GA P P+ SR
Sbjct: 738 GHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE-PPAPLTSR 793
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 490 GHSVAKPQPSGLI-PCSPFCPGEAGKVSGTAIILXXXXXXXXXRGGARYPIRPIVSR 657
GH+ P P L+ P P CPG+A +V+ +L R GA P P+ SR
Sbjct: 254 GHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE-PPAPLTSR 309
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 490 GHSVAKPQPSGLI-PCSPFCPGEAGKVSGTAIILXXXXXXXXXRGGARYPIRPIVSR 657
GH+ P P L+ P P CPG+A +V+ +L R GA P P+ SR
Sbjct: 743 GHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE-PPAPLTSR 798
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 490 GHSVAKPQPSGLI-PCSPFCPGEAGKVSGTAIILXXXXXXXXXRGGARYPIRPIVSR 657
GH+ P P L+ P P CPG+A +V+ +L R GA P P+ SR
Sbjct: 738 GHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE-PPAPLTSR 793
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,588,244
Number of Sequences: 237096
Number of extensions: 2697678
Number of successful extensions: 6140
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6140
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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