Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2281
         (484 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...    30   1.9  
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...    30   1.9  
AY060466-1|AAL25505.1|  626|Drosophila melanogaster SD04853p pro...    29   4.4  
AE014296-3304|AAN11624.1|  981|Drosophila melanogaster CG17233-P...    29   4.4  
AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-P...    29   4.4  
AE014296-3302|AAN11623.1| 1173|Drosophila melanogaster CG17233-P...    29   4.4  
BT022387-1|AAY54803.1|  212|Drosophila melanogaster IP08076p pro...    28   7.7  
AE014297-4236|AAN14140.1|  212|Drosophila melanogaster CG31051-P...    28   7.7  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 471 GERGMFCKAIKLGNARVFPVTTFVKRRPVNCNTTHYRAN 355
           GER +F K  K      +P  TFVK+RP   N + ++ N
Sbjct: 75  GERTVFLKKSKAS----YPTKTFVKKRPSKANFSEHKRN 109


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 471 GERGMFCKAIKLGNARVFPVTTFVKRRPVNCNTTHYRAN 355
           GER +F K  K      +P  TFVK+RP   N + ++ N
Sbjct: 75  GERTVFLKKSKAS----YPTKTFVKKRPSKANFSEHKRN 109


>AY060466-1|AAL25505.1|  626|Drosophila melanogaster SD04853p
           protein.
          Length = 626

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 388 WPAFYKRRDWENPGVTQLNCLAEHSP 465
           WP  +   +WE   +TQ NC   H P
Sbjct: 483 WPKCHVFSEWEQNNLTQKNCAGCHQP 508


>AE014296-3304|AAN11624.1|  981|Drosophila melanogaster CG17233-PB,
           isoform B protein.
          Length = 981

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 388 WPAFYKRRDWENPGVTQLNCLAEHSP 465
           WP  +   +WE   +TQ NC   H P
Sbjct: 838 WPKCHVFSEWEQNNLTQKNCAGCHQP 863


>AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-PC,
            isoform C protein.
          Length = 1465

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 388  WPAFYKRRDWENPGVTQLNCLAEHSP 465
            WP  +   +WE   +TQ NC   H P
Sbjct: 1322 WPKCHVFSEWEQNNLTQKNCAGCHQP 1347


>AE014296-3302|AAN11623.1| 1173|Drosophila melanogaster CG17233-PA,
            isoform A protein.
          Length = 1173

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 388  WPAFYKRRDWENPGVTQLNCLAEHSP 465
            WP  +   +WE   +TQ NC   H P
Sbjct: 1030 WPKCHVFSEWEQNNLTQKNCAGCHQP 1055


>BT022387-1|AAY54803.1|  212|Drosophila melanogaster IP08076p
           protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 105 TGRYHRPANFCREAVMRFGLKGGAGRCNYTE 197
           +GR H P N CR    +  LK    R NYT+
Sbjct: 67  SGRGHEPPNTCRILQRKLELKVERARRNYTQ 97


>AE014297-4236|AAN14140.1|  212|Drosophila melanogaster CG31051-PA
           protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 105 TGRYHRPANFCREAVMRFGLKGGAGRCNYTE 197
           +GR H P N CR    +  LK    R NYT+
Sbjct: 67  SGRGHEPPNTCRILQRKLELKVERARRNYTQ 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,218,146
Number of Sequences: 53049
Number of extensions: 605363
Number of successful extensions: 1247
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)