Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2281
(484 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 25 0.42
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 3.0
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 4.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 5.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 5.2
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 6.9
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 6.9
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 9.1
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 9.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.1
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 9.1
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 25.0 bits (52), Expect = 0.42
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 333 LRGGPGPNSPYSESYYNLLAGVL 401
L+G PG NSPY+ + L+A VL
Sbjct: 26 LQGFPGKNSPYTVTQAILIALVL 48
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 3.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 399 KRRPVNCNTTHYRANWVRAP 340
K++P +C+T YR V P
Sbjct: 565 KKQPSDCDTLEYRNGEVTTP 584
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 4.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 199 PYNLYLKGGGAFTL 240
PY Y GGGAF +
Sbjct: 8 PYLCYKNGGGAFLI 21
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 199 PYNLYLKGGGAF 234
PY Y GGGAF
Sbjct: 46 PYLCYKNGGGAF 57
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 199 PYNLYLKGGGAF 234
PY Y GGGAF
Sbjct: 99 PYLCYKNGGGAF 110
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.0 bits (42), Expect = 6.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +3
Query: 393 GVLQTS*LGKPWRY 434
G+LQ+ L PW Y
Sbjct: 275 GILQSGTLNAPWSY 288
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.0 bits (42), Expect = 6.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +3
Query: 393 GVLQTS*LGKPWRY 434
G+LQ+ L PW Y
Sbjct: 275 GILQSGTLNAPWSY 288
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 20.6 bits (41), Expect = 9.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 50 CSIHIETYVLVVGPLVSPHG*VPPPCQFLP 139
C++ I T+ L P + P+ V P FLP
Sbjct: 438 CTVVIGTFKLHRQPHIYPNPDVFDPDNFLP 467
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.6 bits (41), Expect = 9.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 50 CSIHIETYVLVVGPLV 97
C+I I+ Y+ V PL+
Sbjct: 130 CAISIDRYLAVTQPLI 145
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 9.1
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1
Query: 421 NPGVTQLNCLAEHS 462
NP + +++C EHS
Sbjct: 417 NPDIFRVSCATEHS 430
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.6 bits (41), Expect = 9.1
Identities = 8/23 (34%), Positives = 9/23 (39%)
Frame = +3
Query: 159 GLKGGAGRCNYTETLQLISQGGW 227
G+ RCN T I GW
Sbjct: 356 GVMRAVKRCNATGAFSWIGSDGW 378
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 20.6 bits (41), Expect = 9.1
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1
Query: 421 NPGVTQLNCLAEHS 462
NP + +++C EHS
Sbjct: 123 NPDIFRVSCATEHS 136
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,140
Number of Sequences: 438
Number of extensions: 3928
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -