Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2279
(670 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 37 0.013
09_04_0559 + 18516732-18516746,18516893-18517330 36 0.029
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 32 0.48
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 31 0.83
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 31 1.1
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 30 1.9
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 30 1.9
07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382... 29 2.5
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 29 2.5
03_06_0555 - 34693067-34693196,34693450-34693688,34693956-346940... 29 2.5
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 29 3.3
02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523,134... 29 3.3
05_03_0066 + 7980038-7981468 29 4.4
11_01_0768 - 6442332-6443792 28 5.9
08_02_1167 + 24847689-24848156 28 5.9
02_04_0143 + 20172128-20172355,20172452-20173174 28 5.9
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 28 7.7
06_01_0650 - 4701939-4702224,4702513-4702604,4703022-4703049,470... 28 7.7
01_05_0629 + 23809899-23810720 28 7.7
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +2
Query: 407 SEIPDAEAKSADIKVEEP---AAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 577
+E P AEA S + K EEP AA E +K E +A A ++E KP+ + E
Sbjct: 167 TEEPKAEASSEEAKTEEPKAEAAADEPAKEESKAEAAP-AEEAKPAEPEPEEKTVVVTEE 225
Query: 578 PNMVKKIDLASNVESDAAAVPEIKTSEAADA 670
K ++ AAA P +E A A
Sbjct: 226 EAATKTVEAIEETVVPAAAAPAAAATEEAAA 256
>09_04_0559 + 18516732-18516746,18516893-18517330
Length = 150
Score = 35.9 bits (79), Expect = 0.029
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 398 AKSSEIPDAEAKSADIKVEE-PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAI 574
A+ +E +AE +A+ EE A+PE ++ E + E++ E +A A+ AA
Sbjct: 54 AEVAETKEAEPAAAEPAAEEVKEAEPEPAEPEAEPAKEEVAPEPAAAAEAEAKEAEPAAQ 113
Query: 575 IPNMVKKIDLASNVESDAAAVPEIKTSEAA 664
+ VK+ + A A A E+K EAA
Sbjct: 114 VAEEVKEEEAAP-----APAAEEVKVEEAA 138
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/91 (31%), Positives = 42/91 (46%)
Frame = +2
Query: 398 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 577
A + E AEA+ A+ K EPAA E + EV+ E +P+ +AE + + A
Sbjct: 44 AVAEEAAPAEAEVAETKEAEPAA-AEPAAEEVK------EAEPEPAEPEAEPAKEEVAPE 96
Query: 578 PNMVKKIDLASNVESDAAAVPEIKTSEAADA 670
P + + A E A E+K EAA A
Sbjct: 97 PAAAAEAE-AKEAEPAAQVAEEVKEEEAAPA 126
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 419 DAEAKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 595
+++ S D ++ A +P D +TE++ TV ++ E + G D+ + +
Sbjct: 32 ESQGPSGDQTLDSDVANEPNDGETEIETTVDDVLSESTHEQVENHGDGDN---VDDSSVH 88
Query: 596 IDLASNVESDAAAVPEI 646
IDL S SD A PEI
Sbjct: 89 IDLDS---SDTAFQPEI 102
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 31.1 bits (67), Expect = 0.83
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 8/125 (6%)
Frame = +2
Query: 293 PAIPEAKK--------DDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIK 448
P IPE+K+ + +P++ DI +S +P++ + + DIK
Sbjct: 1272 PQIPESKELSQQSKILPESSPDNHDIKCEYSSPTPIPESKELSLQSKILPESSSDNQDIK 1331
Query: 449 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLASNVESDA 628
E+P+ P EV + ++I E D E S+ +I + +LA ++
Sbjct: 1332 CEDPSPTPISKSKEV-SPQSKILSESYLDNQDVERECPSSILI---TESKELAVDLPGSI 1387
Query: 629 AAVPE 643
+ PE
Sbjct: 1388 SLAPE 1392
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +2
Query: 407 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKE--EKPSATDAEGSADSAAIIP 580
S + K DI + + P+D ++ + +KE EK A D + A+S +I
Sbjct: 464 SAVDKGTGKKQDITITGASTLPKDEVEKMVEEAEKFAKEDKEKRDAIDTKNQAES--VIY 521
Query: 581 NMVKKI-DLASNVESDAAAVPEIKTSEAADA 670
K++ +L V D E K +E DA
Sbjct: 522 QTEKQLKELGDKVPGDVKGKVEAKLTELKDA 552
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 398 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE-GSADSAA 571
AK ++E ++ D++ +E A + E+ + E +A E E+K DAE G+A+ A
Sbjct: 63 AKEEGASESEGEAMDVEAKESADEKEEEEAEAEADGDE--GEDKSDEMDAEAGAAEEEA 119
>03_06_0157 -
32039020-32039175,32039267-32039338,32039478-32039602,
32039678-32040559,32040623-32040692,32041248-32041739,
32041985-32042044,32042541-32042618,32043322-32044344
Length = 985
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 428 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 607
A+ D E+ E+ + EVQ V E +P DAEG+A A ++ + +
Sbjct: 255 AQDGDDVEEQKGEGEEEMEEEVQVEVQEKRGRGRPRKADAEGNALQARVLRELGLRASQY 314
Query: 608 SNVE 619
+N E
Sbjct: 315 TNEE 318
>07_01_0513 +
3828196-3828309,3828408-3828722,3828823-3828879,
3829668-3829826,3829918-3830028,3830173-3830259,
3830359-3830591,3830808-3830886,3831173-3831316,
3831529-3831568,3831667-3831729,3832193-3832224,
3832320-3832361,3832444-3832557
Length = 529
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +2
Query: 425 EAKSADIKVEEPAAQPEDSKTE--VQATVAEISK--EEKPSAT 541
E++S DIK + +AQP +K E VQAT++ + K EEK T
Sbjct: 394 ESQSEDIKPADSSAQPISAKKEPLVQATLSSMFKKAEEKKRCT 436
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +2
Query: 398 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 571
A ++E P AEA++ E AA E+ KTE T E +KEE+P A A + + A
Sbjct: 133 APAAEEPKAEAEA-----EAEAAATEEPKTEEPKT-EEPAKEEEPKAAAAAAAEEPKA 184
>03_06_0555 -
34693067-34693196,34693450-34693688,34693956-34694033,
34694057-34694131,34694667-34694831,34695101-34695151,
34695250-34695300,34695462-34695533,34695736-34695948,
34696064-34696214,34696376-34696490,34696665-34696748,
34696841-34696964,34697064-34697145,34697238-34697299,
34697787-34697840,34697944-34698147
Length = 649
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 473 EDSKTEVQATVAEISKEEKPSATDAEGSADSAA-IIPNMVKKIDLASNVESDAA 631
+D+K + + E++K K D + +++SAA IP K+D+A+N E D +
Sbjct: 397 DDTKLVTKIVIQELAKHLKQLIFDKDEASESAAEDIPE--NKVDVATNKEQDGS 448
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 455 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEG 553
EP A PE + + Q + +K+ PSA D +G
Sbjct: 132 EPPAPPEPKQQQQQQQAGDAAKQAAPSADDEDG 164
>02_01_0201 -
1347868-1347925,1348040-1348135,1348447-1348523,
1349385-1349453,1349576-1349629,1350295-1350350,
1350487-1350694,1350978-1351066,1351163-1351187
Length = 243
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 498 ACTSVFESSG*AAGSSTLISADFASASGISDDF 400
+CT +F+SS +A + ++A FA AS D+F
Sbjct: 64 SCTYIFDSSDASASGAADVAATFAKASRKMDEF 96
>05_03_0066 + 7980038-7981468
Length = 476
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +2
Query: 401 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 580
K+ ++ D + K KVE + E SK E+ + E SKEE S A+SA+ +
Sbjct: 388 KAKKVLDRKLKEK--KVESNSTVTEKSK-ELTSRETEESKEELTSRKTDANDAESASSVA 444
Query: 581 NMVKK 595
+KK
Sbjct: 445 EAIKK 449
>11_01_0768 - 6442332-6443792
Length = 486
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = +2
Query: 398 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 577
A + P AE+ +AD K PAA+ A KE P+A +A SAA
Sbjct: 292 ADKNAYPAAES-TAD-KETSPAAESTADTATSAAAGPTADKETSPAAESTADTATSAAAG 349
Query: 578 PNMVKKIDLASNVESDAA 631
K+ LA+ +D A
Sbjct: 350 STADKETSLAAEPTADTA 367
>08_02_1167 + 24847689-24848156
Length = 155
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 398 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQA 499
AK E P+AEA++A VEE AA P + E +A
Sbjct: 108 AKEPE-PEAEAEAAAAPVEEAAAAPVEVAEEAEA 140
>02_04_0143 + 20172128-20172355,20172452-20173174
Length = 316
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = +2
Query: 422 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 601
+E ++ + E AA+PE ++ E+++EEK D+ A +A+ P+ D
Sbjct: 233 SEQETTGEEAEAAAAEPEAAQEGGGGGAQEVAEEEKRVDPDSVQVAAAASSTPSPPSSAD 292
Query: 602 LASNVESDAAAVPEIKTSEAAD 667
+S A ++ A D
Sbjct: 293 DDEEEKSKEEAAADVSAPAAPD 314
>09_04_0247 + 16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 419 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 568
D + K++ +K EE + SKTE A + KEEK A D+ +A++A
Sbjct: 1268 DPDFKNSYLKKEE-STDDASSKTEETTNNASLQKEEK--ANDSSKNAENA 1314
>06_01_0650 -
4701939-4702224,4702513-4702604,4703022-4703049,
4703440-4703479,4703611-4703672,4703864-4703927,
4704043-4704081,4705571-4705625,4705730-4705786
Length = 240
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +2
Query: 398 AKSSEIPDAEAKSADI--KVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 571
AK+S + E+K+ K+ + + + +++ TVAE +E P+ + AA
Sbjct: 136 AKASLAYNCESKNCPHFRKMFPEYVEKYNQQKQMEQTVAEPETQENPAPAPSPAVQQQAA 195
Query: 572 IIPNMVKKIDLASNVESDAAAVP 640
++ N K A+ + VP
Sbjct: 196 VVANKAKPAAEAAGEQKQKKRVP 218
>01_05_0629 + 23809899-23810720
Length = 273
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +2
Query: 473 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLASNVESDAAAVPEIKT 652
E S+ + AT A E P+ATDA S S A D + E+D AA +
Sbjct: 99 EPSEADPAATDASEPSEADPAATDA--SEPSEADPAPRATSADASEPSEADPAATDASEP 156
Query: 653 SEAADA 670
SEA A
Sbjct: 157 SEADPA 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,266,825
Number of Sequences: 37544
Number of extensions: 208909
Number of successful extensions: 711
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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