Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2279
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 31 0.56
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 31 0.74
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.3
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 2.3
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 29 3.0
U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 3.9
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 5.2
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 5.2
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 5.2
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 5.2
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 5.2
Z49911-7|CAA90129.1| 861|Caenorhabditis elegans Hypothetical pr... 28 6.9
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 6.9
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 6.9
U58728-1|AAB00588.1| 430|Caenorhabditis elegans Temporarily ass... 27 9.1
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 31.5 bits (68), Expect = 0.56
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +2
Query: 398 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 571
A+++E A A +A+ E PA+ P +T A AE + P+A T A + +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740
Query: 572 IIPNMVKKIDLASNVESDAAAVPEIKTSEAADA 670
P + D A + ++ A+ +S+A+ A
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDASGA 773
Score = 28.3 bits (60), Expect = 5.2
Identities = 25/101 (24%), Positives = 38/101 (37%)
Frame = +2
Query: 278 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 457
+++ PA EA D A ++ A A SS +P+ A E
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562
Query: 458 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 580
PA P +T A AE + P+A + +A +A P
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETP 603
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.74
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Frame = +2
Query: 401 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 565
KS E P E K ++ V +EPAA E+ K + V E KEE P++ +E D
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183
Query: 566 AAIIPNMVKKIDL----ASNVESDAAAVPEIKTSEA 661
+ N +K D A++ ES+AA +T+ A
Sbjct: 184 PVV--NTEEKKDAAEAPAADEESEAAEEKVAETTVA 217
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 449 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 595
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 398 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 559
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 431 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 607
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
>U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical
protein R08C7.5 protein.
Length = 491
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = +2
Query: 410 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 589
E P A+ + +K+ + P+ KT VA+ KE+KP + +A A I +V
Sbjct: 314 EKPTAKTAAPPVKLLTSSPPPKIPKT-----VAQPPKEKKPVMESVKTAAPPAKEIKPIV 368
Query: 590 KKIDLASNVESDAAAVPEIKTSEAADA 670
KI + ++ A E+K ++AA A
Sbjct: 369 AKI---TEKAAEPAVPKEVKPAKAATA 392
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 28.7 bits (61), Expect = 3.9
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 407 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 586
S P+A + D AAQ ED +E Q + E E AE SAA +
Sbjct: 2855 SVAPNASTRGDDTLTTPAAAQVEDQASEDQ-HIEEEPMEVGEDDGAAEAPQSSAATAASS 2913
Query: 587 VKKIDLASNVESDAAA--VPEIKTSE 658
V + +VE A VPEI+ ++
Sbjct: 2914 VAGTEEIEDVERQAVEDHVPEIQDND 2939
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +2
Query: 401 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 556
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 557 ADSAAIIPNMVKK 595
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 131 VSLAMPVAEEKDVVPAQPIL 190
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 131 VSLAMPVAEEKDVVPAQPIL 190
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 131 VSLAMPVAEEKDVVPAQPIL 190
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 131 VSLAMPVAEEKDVVPAQPIL 190
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>Z49911-7|CAA90129.1| 861|Caenorhabditis elegans Hypothetical
protein M28.9 protein.
Length = 861
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = +2
Query: 401 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 580
KS+ D KS + K +E ++ +D K + + + + KEE+ SA A+G A+ P
Sbjct: 707 KSAGKSDKMLKSKESKEKEEKSENKDKKKKKKKSKKD--KEEEGSAEKADGDANKNPQDP 764
Query: 581 NMVKKIDLASNVESDAAAVPEIKTSEAAD 667
+I + E+ + S+AA+
Sbjct: 765 AAPGEIGRNGSAEAGSQPTSVEGKSDAAE 793
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 410 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 550
E + E + + K+EEPAA+ E+ + E + E EE+ + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 417 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 518
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
>U58728-1|AAB00588.1| 430|Caenorhabditis elegans Temporarily
assigned gene nameprotein 294 protein.
Length = 430
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 440 DIKVEEPAAQPEDSKTEVQATVAEISKEE-KPSATDAEGSADSAAIIPNMVKKIDLASNV 616
++K+EEP E +T V E+S E + + + SA P KK+ ++
Sbjct: 113 EVKIEEPDIASEKPRTPVPEKQEEVSVENVEIEKCETPTKSKSATAKPPSAKKLTKRTDE 172
Query: 617 E-SDAAAVPEIKTSE 658
+ + A + KT+E
Sbjct: 173 DKKSSVATKKAKTTE 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,235,881
Number of Sequences: 27780
Number of extensions: 180740
Number of successful extensions: 736
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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