Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2275
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 40 4e-04
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 32 0.085
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.80
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 27 1.8
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 27 1.8
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 27 1.8
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 2.4
SPCC1020.07 |||haloacid dehalogenase-like hydrolase|Schizosaccha... 27 2.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 2.4
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 27 3.2
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 26 4.2
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 26 5.6
SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 7.4
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 25 9.8
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 25 9.8
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S... 25 9.8
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 39.5 bits (88), Expect = 4e-04
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Frame = +3
Query: 9 WYQSIVQAIRWVKDNIHHFGGNAGNLTIFGESAGARAV--SLL--TASPLTKNLISKAII 176
W Q + + W +I FGGN N+ + G SAG+ + L+ T P +I +A++
Sbjct: 168 WDQRL--GLEWTYKHIESFGGNKENIAVGGISAGSYSALFQLIYETYHPEANQIIKRALL 225
Query: 177 QS-GNALSSRAFQRDPLQSAKALARSLGCEAE-DVDEILEFLIATPAKDLVEADEKLN 344
S G ++ ++ + +Q LA+ G E E LE L A P +DL AD LN
Sbjct: 226 LSNGLSVQPKSVEESQIQ-FNELAQKFGIPLELSSAEKLEKLRAIPFQDL--ADNILN 280
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 31.9 bits (69), Expect = 0.085
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 72 NAGNLTIFGESAGAR--AVSLLTASPLTKNLISKAIIQSGNALSSRAFQRDPLQSAKA 239
N + I+G+ R +SL +P NL S +I S N L +FQ+DP A A
Sbjct: 351 NGTVVRIYGKDEAVRFTRLSLYQQAPKKSNLPSLDVIASNNPLVEESFQKDPTLFATA 408
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.7 bits (61), Expect = 0.80
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Frame = -3
Query: 607 ISSTIAKASSEFLSMFRSAGINS*RSSDFLSQAYSNDVVPTSIG--MLAVLPDVSMLMKG 434
+SST+ SS S S +S SS S S+ +PTS + + +S +
Sbjct: 507 VSSTLLSGSSAIPSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISS 566
Query: 433 SLI--TASTPGN--SFSITSPNKLLLVSRTFCKEFNFSSASTKSLAGVAIKNSRISS 275
S I T S+ + S S +SP+ L + FSSAST S + ++ S S+
Sbjct: 567 SSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSST 623
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = -3
Query: 604 SSTIAKASSEFLSMFRSAGINS*RSSDFLSQAYSNDVVPTSIGMLAVLPDVSMLMKGSLI 425
SST + A+++ ++ +N +S S AY+ D V ++ + + P S ++ SL
Sbjct: 828 SSTTSLAANKGVNSNSITSLNLESTSSVTSTAYTTDSVTSTTALTSQGPS-SSVVSSSLS 886
Query: 424 TASTPGNSFSITS 386
+ ++ S +TS
Sbjct: 887 STTSLSTSIPVTS 899
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 264 AEDVDEILEFLIATPAKDLVEADEKLNSLQKVLETSNNLFGLVIEKEFPGVEAVISEP 437
+E+V L+ L+ KD+ +E LN K+L + NL L+ EKE E+ + P
Sbjct: 248 SEEVVTTLKNLLEVKDKDVEGRNEALN---KILHPAKNLVELLTEKENLINESTLESP 302
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 608 KEIVFQRGTTQEWESLPEY 664
KEI+F + +WE LP+Y
Sbjct: 999 KEILFPKSNLADWEQLPDY 1017
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 523 FLSQAYSNDVVPTSIGMLAVLPDVSML-MKGSLITASTPGNSFSITSPNKLLLVSRTFC 350
F+S ++ + I +L+ +P +++L MK + + S N + + P KL L+ +C
Sbjct: 482 FISALQKGGMLQSIIRLLSTMPRLTLLLMKTNDLVRSLDENLKTKSGPEKLYLIMARYC 540
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 607 ISSTIAKAS-SEFLSMFRSAGINS*RSSDFLSQAYSNDVVPTSIGMLAVLPDVSMLMKGS 431
++S I+ S + +S S I+S +SS+F+ Q + S+G L S + G+
Sbjct: 614 VTSEISSTSLASLISTLTSQQISSNKSSEFVGQTTTEYTTSGSVGFTTTLATQSGSVPGT 673
Query: 430 -LITASTP 410
L+ TP
Sbjct: 674 VLVDVPTP 681
>SPCC1020.07 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 441 INILTSGRTANIPILVGTTSLEYACERKSDDLQEL 545
+N+L+ ++ NIPI + T+S + E+KS L L
Sbjct: 92 MNLLSKLKSLNIPIALATSSDTHNFEKKSAHLSHL 126
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 397 SITSPNKLLLVSRTFCKEFNFSSASTKSLAGVAIKNSRI 281
++ PNK V+ + K+F FSS S A++NS++
Sbjct: 52 TLIQPNKSQSVTSPYVKQFTFSSKEYNSHNKHALQNSQL 90
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 12 YQSIVQAIRWVKDNIHHFGGN-AGNLTIFGESAGARAVSLLT 134
+ + + +WV NI G N + G SAG VS+L+
Sbjct: 141 HNDAIDSFKWVASNIEKLGANPKRGFFLGGASAGGNFVSVLS 182
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 4.2
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +3
Query: 222 LQSAKALARSLGCEAED----VDEILEFLIATPAKDLVEADEKLNSLQKVLETSNNLFGL 389
+ AK LAR G + +DE ++ LI+ + + ++NS+Q TSN
Sbjct: 80 IHGAKVLARISGANPQKLKAAIDEYIQPLISQISSTNASVETQVNSVQTTNTTSNT---- 135
Query: 390 VIEKEFPGVEAVISEPFINILTSGRTANIPILVGTTSLEYAC 515
K G+++ ++E ++ LT+ N+ + + T E AC
Sbjct: 136 --SKAPNGLDSELNER-LSTLTNAH--NVMLFLKGTPSEPAC 172
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 5.6
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = -3
Query: 535 RSSDFLSQAYSNDVVPTSIGMLAV----LPDVSMLMKGSLITASTPGNSFSITSPNKLLL 368
R++ FLS +S VV + IG+L V LP ++ S A T G + S+ LL
Sbjct: 184 RANYFLSICFSVSVVVSLIGLLGVWQKLLPKSNVYSVSSSSFARTFGFA-SLAVAEILLF 242
Query: 367 VSRTFCKEFNFS--SASTKSLAGVAIKN 290
+ T F F +A + G+A K+
Sbjct: 243 IYWTSLSIFQFGAYAAGVAIMCGIAAKS 270
>SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 163
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 132 TASPLTKNLISKAIIQSGNALSSRAFQRDPLQSAKALARSLGCEAEDVDE 281
T+ +TKNLI+ + ++SS DP A+ LG +D E
Sbjct: 16 TSISITKNLINSWLGNENTSVSSDEKNDDPPLQARPPRLGLGASRKDQSE 65
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.0 bits (52), Expect = 9.8
Identities = 22/101 (21%), Positives = 40/101 (39%)
Frame = +3
Query: 342 NSLQKVLETSNNLFGLVIEKEFPGVEAVISEPFINILTSGRTANIPILVGTTSLEYACER 521
NS + V TS N + ++P +N+ T N+ +LE +
Sbjct: 1077 NSTKPVAVTSKNGHSRNGSHAAHSNNVIGTQPHVNVSAVPNTGNLK-----DALEGSAVS 1131
Query: 522 KSDDLQELIPADLNIDRNSEEALAIVEEIKKLYFKGEPHRS 644
K+DD+ ++ N++ S+ IVE + P +S
Sbjct: 1132 KTDDVDNVVSGHSNVNGVSKSRPNIVERSEDYVISHLPEQS 1172
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 412 PGNSFSITSPNKLLLVSRTFCKEFNFSSAST 320
P S SI++P L S +NF +AST
Sbjct: 206 PSRSISISNPQSLSFPSSFDQSNYNFQAAST 236
>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
Vps33|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 25.0 bits (52), Expect = 9.8
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +3
Query: 294 LIATPAKDLVEADEKLNSLQKVLETSNNLFGLVIEKEFPGVEAVISEPFINILTSGRTAN 473
L+AT + ++ S VL TSN LF V+++E E +++E ++ + +
Sbjct: 81 LVATHVRQFQRDMLRIESTVIVLPTSNILFETVLQEEGVFGELLVTEWPLHAVPLDKDL- 139
Query: 474 IPILVGTTSLEYACERKSDD 533
+ + +G LE + ++S D
Sbjct: 140 LSLELGPEKLEESLLQRSTD 159
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,627,748
Number of Sequences: 5004
Number of extensions: 49657
Number of successful extensions: 219
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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