Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2272
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              25   0.49 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.86 
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              22   4.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   8.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   8.0  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 567 LKKKRQNHGTNCNFSSIDI*ELQSLYLDERERN 665
           L KK   +    NF+ + + E+  +YLDE E N
Sbjct: 66  LIKKFNAYDDGGNFNEVVVREIAEIYLDENEVN 98


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 258 KPHYDIYRNNVSARS 214
           KPHYDI+ N V+  S
Sbjct: 912 KPHYDIWGNTVNVAS 926


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 567 LKKKRQNHGTNCNFSSIDI*ELQSLYLDERERN 665
           L KK   +    NF+ + I E+  ++LDE   N
Sbjct: 66  LIKKFNGYDDGGNFNEVVIREIAEIFLDENGVN 98


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 282 SSRSGNEPKPHYDIYRNN 229
           SS S N+PK  Y    NN
Sbjct: 104 SSTSSNDPKNQYKNQNNN 121


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 365 EHFGTPD*MFTRSTLPPTP 309
           EH  TP+ +      PPTP
Sbjct: 287 EHTSTPNFLSEAKIFPPTP 305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,066
Number of Sequences: 438
Number of extensions: 3257
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)