Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2270
         (539 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022158-1|AAY51553.1|  409|Drosophila melanogaster IP01393p pro...    29   3.1  
AE013599-3089|AAF46642.3|  409|Drosophila melanogaster CG33152-P...    29   3.1  

>BT022158-1|AAY51553.1|  409|Drosophila melanogaster IP01393p
           protein.
          Length = 409

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 2   RSTCPAERLPTKPHRAPPHRLHETYGT-AVRAERVQPPTQKNHS 130
           RS  P+E L T PH   PH +H  + + +  +  +    Q+ HS
Sbjct: 51  RSDTPSEVLITHPHHGHPHHIHHLHSSNSNGSNHLSHQQQQQHS 94


>AE013599-3089|AAF46642.3|  409|Drosophila melanogaster CG33152-PA
           protein.
          Length = 409

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 2   RSTCPAERLPTKPHRAPPHRLHETYGT-AVRAERVQPPTQKNHS 130
           RS  P+E L T PH   PH +H  + + +  +  +    Q+ HS
Sbjct: 51  RSDTPSEVLITHPHHGHPHHIHHLHSSNSNGSNHLSHQQQQQHS 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,372,880
Number of Sequences: 53049
Number of extensions: 409222
Number of successful extensions: 974
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)