Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2269
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U23519-8|AAK31503.3|  734|Caenorhabditis elegans Hypothetical pr...    29   3.8  

>Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical
           protein C26H9A.2 protein.
          Length = 1334

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 415 LGLMHLKKLFAEYTHPQQPLTDAEKDDKLYNMLPLFCKV 531
           L L+HL+K F+EY   + P++ +  +D    +LPLF KV
Sbjct: 9   LSLLHLRKTFSEYL--KIPVSGSRSNDP-SRLLPLFHKV 44


>U23519-8|AAK31503.3|  734|Caenorhabditis elegans Hypothetical
           protein F26G1.6 protein.
          Length = 734

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
 Frame = -3

Query: 283 TLIKSVPISILNNYL--CIESNY 221
           +LIKS P+S +NN+L  C+ SNY
Sbjct: 380 SLIKSKPLSSINNFLMWCLVSNY 402


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,359,359
Number of Sequences: 27780
Number of extensions: 257479
Number of successful extensions: 647
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)