Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2267
         (785 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0124 - 16942492-16945032,16945478-16945572,16945966-169460...    28   9.7  
03_05_0724 - 27147479-27147706,27147830-27147920,27148002-271480...    28   9.7  

>06_03_0124 -
           16942492-16945032,16945478-16945572,16945966-16946076,
           16946142-16946229
          Length = 944

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 243 KGWEKRCLIQLRDFGLNHTDGGFFCPCRQTSIGGCRGA 130
           K  E+  L+QL D G+ +    FF P  +T++ GC+ A
Sbjct: 457 KSNEEFPLVQL-DSGVGYVGTNFFPPAAKTNLTGCKSA 493


>03_05_0724 -
           27147479-27147706,27147830-27147920,27148002-27148060,
           27148197-27148312,27148389-27148472,27148677-27148824,
           27148958-27149103,27149610-27149729,27149900-27149998,
           27150787-27150828,27150915-27151017
          Length = 411

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 479 TRHAVRGHKYHKYSLSIILATEQS 550
           +RH VRGH YH   L+ +  T  S
Sbjct: 242 SRHVVRGHGYHTDGLTCLSVTSDS 265


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,262,515
Number of Sequences: 37544
Number of extensions: 412469
Number of successful extensions: 802
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)