Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2267
         (785 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069238-1|AAL39383.1|  503|Drosophila melanogaster GH28769p pro...    33   0.58 
AE014296-1401|AAF50464.1|  503|Drosophila melanogaster CG8006-PA...    33   0.58 
AJ278684-1|CAB99191.1|  488|Drosophila melanogaster gag-like pro...    30   3.1  
BT004865-1|AAO45221.1|  233|Drosophila melanogaster LD44422p pro...    29   5.4  
AE014296-1784|AAF50179.1|  233|Drosophila melanogaster CG6674-PA...    29   5.4  
AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P...    29   7.2  
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P...    29   7.2  

>AY069238-1|AAL39383.1|  503|Drosophila melanogaster GH28769p
           protein.
          Length = 503

 Score = 32.7 bits (71), Expect = 0.58
 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +1

Query: 133 PTTSTYACLPTRAKKTTIRMI*AKVSQLY*TT-FLPPFNSESSTALRQK*VVQCQLS 300
           PTTS++A + T  +KT  R   +K SQ+Y  T F  P  ++S T  ++  +++ +LS
Sbjct: 136 PTTSSFASIVTIIRKTNTRSSDSKDSQVYPRTGFESPNGADSHTVKKRVELLEYELS 192


>AE014296-1401|AAF50464.1|  503|Drosophila melanogaster CG8006-PA
           protein.
          Length = 503

 Score = 32.7 bits (71), Expect = 0.58
 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +1

Query: 133 PTTSTYACLPTRAKKTTIRMI*AKVSQLY*TT-FLPPFNSESSTALRQK*VVQCQLS 300
           PTTS++A + T  +KT  R   +K SQ+Y  T F  P  ++S T  ++  +++ +LS
Sbjct: 136 PTTSSFASIVTIIRKTNTRSSDSKDSQVYPRTGFESPNGADSHTVKKRVELLEYELS 192


>AJ278684-1|CAB99191.1|  488|Drosophila melanogaster gag-like
           protein protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 228 RCLIQLRDFGLNHTDGGFFCPCRQTSIGG 142
           RCLI   D   NH  GGF CP  + +  G
Sbjct: 449 RCLICSSDVDKNHATGGFACPTYKANTKG 477


>BT004865-1|AAO45221.1|  233|Drosophila melanogaster LD44422p
           protein.
          Length = 233

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 443 LKIGGVIAIKTATRHAVRGHKYHKYSLSIILATEQSN 553
           L IG  +  +    + V  HK+ KYSLS +  +EQSN
Sbjct: 88  LPIGRCLKPRKTPDYQVNPHKWKKYSLSDVDISEQSN 124


>AE014296-1784|AAF50179.1|  233|Drosophila melanogaster CG6674-PA
           protein.
          Length = 233

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 443 LKIGGVIAIKTATRHAVRGHKYHKYSLSIILATEQSN 553
           L IG  +  +    + V  HK+ KYSLS +  +EQSN
Sbjct: 88  LPIGRCLKPRKTPDYQVNPHKWKKYSLSDVDISEQSN 124


>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-PB,
            isoform B protein.
          Length = 2968

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -2

Query: 424  KCRGSLVGGLYHHSSPKYKARMPQRGTLRTL--ASRTKKA 311
            KC+G  + GLY  SS    A +P RG L  L  A RT  A
Sbjct: 1384 KCQGQCMTGLYPRSSSWDSALLPTRGCLDDLNEAERTSCA 1423


>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-PA,
            isoform A protein.
          Length = 2931

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -2

Query: 424  KCRGSLVGGLYHHSSPKYKARMPQRGTLRTL--ASRTKKA 311
            KC+G  + GLY  SS    A +P RG L  L  A RT  A
Sbjct: 1347 KCQGQCMTGLYPRSSSWDSALLPTRGCLDDLNEAERTSCA 1386


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,561,269
Number of Sequences: 53049
Number of extensions: 691284
Number of successful extensions: 1385
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)