Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2264
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 334 3e-92
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 329 1e-90
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 299 1e-81
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 299 1e-81
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 299 1e-81
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 4.7
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 4.7
AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical ... 29 4.7
AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical... 28 6.3
AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical ... 28 6.3
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 6.3
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 28 8.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 8.3
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 28 8.3
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 334 bits (822), Expect = 3e-92
Identities = 159/233 (68%), Positives = 188/233 (80%)
Frame = +2
Query: 56 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 235
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 236 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 415
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 416 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQS 595
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A+ LARYASICQ
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLARYASICQQ 180
Query: 596 QRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNM 754
+VPIVEPE+LPDGEH L R QK+TE VL+ VY ALN+HHV+LEGTLLKPNM
Sbjct: 181 NGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNM 233
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 329 bits (809), Expect = 1e-90
Identities = 158/234 (67%), Positives = 188/234 (80%), Gaps = 1/234 (0%)
Frame = +2
Query: 56 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 235
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 236 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 415
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 416 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA-NVLARYASICQ 592
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A N+ +RYASICQ
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQ 180
Query: 593 SQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNM 754
+VPIVEPE+LPDGEH L R QK+TE VL+ VY ALN+HHV+LEGTLLKPNM
Sbjct: 181 QNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNM 234
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 299 bits (735), Expect = 1e-81
Identities = 150/225 (66%), Positives = 175/225 (77%)
Frame = +2
Query: 80 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 259
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 260 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 439
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 440 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 619
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 620 PEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNM 754
PEVL DGEHDL RAQKVTE VLA VYKAL DHHVYLEGTLLKPNM
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNM 236
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 299 bits (735), Expect = 1e-81
Identities = 150/225 (66%), Positives = 175/225 (77%)
Frame = +2
Query: 80 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 259
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 260 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 439
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 440 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 619
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 620 PEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNM 754
PEVL DGEHDL RAQKVTE VLA VYKAL DHHVYLEGTLLKPNM
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNM 236
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 299 bits (735), Expect = 1e-81
Identities = 150/225 (66%), Positives = 175/225 (77%)
Frame = +2
Query: 80 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 259
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 260 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 439
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 440 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 619
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 620 PEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNM 754
PEVL DGEHDL RAQKVTE VLA VYKAL DHHVYLEGTLLKPNM
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNM 236
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +2
Query: 86 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 229
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 230 YRQLLFSSDA 259
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +2
Query: 86 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 229
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 230 YRQLLFSSDA 259
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +2
Query: 86 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 229
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 230 YRQLLFSSDA 259
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical
protein R02F11.2 protein.
Length = 721
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -3
Query: 521 GRSSARNATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 414
GR N G RPS +G AG RP GWC+++
Sbjct: 253 GRPRPGNGGGGGGVRPSNSGCDAGWRRFNRPSGGWCVKV 291
>AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical
protein Y51H4A.16 protein.
Length = 136
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2
Query: 374 IKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQE 553
++V + V L + E T + L LAQ+ ++ +D W+C+ G +T + ++I+E
Sbjct: 22 VRVVERAVALHKNSKEKTNEKL--LAQKSGKWARDAESRNTWKCIRAPGAHTHTGESIKE 79
Query: 554 N 556
+
Sbjct: 80 S 80
>AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical
protein C08G5.1 protein.
Length = 882
Score = 28.3 bits (60), Expect = 6.3
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 4/160 (2%)
Frame = +2
Query: 197 GVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGI 376
G+EN+E + + V+ G+ + + QK D L K +I GI
Sbjct: 582 GIENSENTKTESFASIAKDSQVVGMATRGITIMEQMASQKVD-------LKPLKVLIAGI 634
Query: 377 KVD-KGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKW-RCV--LKIGRNTPSYQA 544
KV+ K V P ED + L L + KK+ F K + V K+ + +QA
Sbjct: 635 KVEMKNVDP----EDAKNLKSLYGLESELNRIKKEAGTFMKTVKPVNSTKLSDYSEIFQA 690
Query: 545 IQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQ 664
++ V ++I S I+ I P L +AQ
Sbjct: 691 VKSVKGVSMNLSAIIGSVEILKIRLPSRTRRAASGLTKAQ 730
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 323 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 427
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 728 RGTRGGRSAPCTRRPERPQSPSGRGPGRARHQVRLRARQSARCVGSDRWKRSGR 567
R RS +R R +SP+ R +RH+ R + R +R R + SGR
Sbjct: 177 RSPSRSRSRSRSRSVSRSKSPASRNGRVSRHRSRSQNRSRSRSNTRSRSRSSGR 230
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 728 RGTRGGRSAPCTRRPERPQSPSGRGPGRARHQVRLRARQSARCVGSDRWKRSGR 567
R RS +R R +SP+ R +RH+ R + R +R R + SGR
Sbjct: 177 RSPSRSRSRSRSRSVSRSKSPASRNGRVSRHRSRSQNRSRSRSNTRSRSRSSGR 230
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -3
Query: 503 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 414
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical
protein F08H9.2 protein.
Length = 130
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 710 RSAPCTRRPERPQSPSGRGPGRARHQVRLRARQSARCVGSDRWK-RSGR 567
R+ TRR ++PS R+R + R R+R +R S R + RS R
Sbjct: 47 RTNSLTRRRSSTKAPSSARQSRSRSRSRSRSRSKSRSTSSRRSRSRSAR 95
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -3
Query: 731 PRGTRGGRSAPCTRRPERPQSPSGRG--PGRARHQ 633
P G G R P PE PQ P+GR PG++ Q
Sbjct: 259 PLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSGPQ 293
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 477 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 316
S L +Q +S P VV SSS +S T ST+ P +S + PS++
Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -3
Query: 731 PRGTRGGRSAPCTRRPERPQSPSGRG--PGRARHQ 633
P G G R P PE PQ P+GR PG++ Q
Sbjct: 259 PLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSGPQ 293
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,053,712
Number of Sequences: 27780
Number of extensions: 421760
Number of successful extensions: 1534
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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