Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2262
(714 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 33 1.0
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 4.1
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 4.1
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 4.1
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 4.1
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 31 4.1
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 4.1
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 33.1 bits (72), Expect = 1.0
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -1
Query: 672 PYTSQCPTKLRSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSRKSLT--PSRRKCLMKSKC 499
P TS PT S +++PT S +PT S + T + + S++ P+ +
Sbjct: 787 PTTSTTPTPQTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAS 846
Query: 498 LLTSPTRSTRRFKCRSS 448
+++PT ST F S+
Sbjct: 847 TISAPTTSTTSFHTTST 863
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 642 RSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR-KSLTPSRRKCLMKSKCLLTSPTRSTRR 466
RS S P R + RS T + + + +T + R +S TP+RR+ +S S +RS R
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 642
Query: 465 FKCRSSKK 442
RS +
Sbjct: 643 RSGRSRSR 650
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPL---KCQYQTLTKSSR-KSLT 535
R ++P + ++ P + RS S +P R RS +R+P + + +T + R +S T
Sbjct: 614 RSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRT 673
Query: 534 PSRRKCLMKSKCLL---TSPTRSTRRFKCRS 451
P+RR +S+ S +R+ RR + RS
Sbjct: 674 PARRSGRSRSRTPARRGRSRSRTPRRGRSRS 704
Score = 29.9 bits (64), Expect = 9.5
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR--KSLTPS 529
R ++P + S+ PT+ RS S P R + RS +R+P + + +T + R +S +P+
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPA 641
Query: 528 RRKCLMKSK 502
RR +S+
Sbjct: 642 RRSGRSRSR 650
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 642 RSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR-KSLTPSRRKCLMKSKCLLTSPTRSTRR 466
RS S P R + RS T + + + +T + R +S TP+RR+ +S S +RS R
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 642
Query: 465 FKCRSSKK 442
RS +
Sbjct: 643 RSGRSRSR 650
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPL---KCQYQTLTKSSR-KSLT 535
R ++P + ++ P + RS S +P R RS +R+P + + +T + R +S T
Sbjct: 614 RSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRT 673
Query: 534 PSRRKCLMKSKCLL---TSPTRSTRRFKCRS 451
P+RR +S+ S +R+ RR + RS
Sbjct: 674 PARRSGRSRSRTPARRGRSRSRTPRRGRSRS 704
Score = 29.9 bits (64), Expect = 9.5
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR--KSLTPS 529
R ++P + S+ PT+ RS S P R + RS +R+P + + +T + R +S +P+
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPA 641
Query: 528 RRKCLMKSK 502
RR +S+
Sbjct: 642 RRSGRSRSR 650
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 642 RSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR-KSLTPSRRKCLMKSKCLLTSPTRSTRR 466
RS S P R + RS T + + + +T + R +S TP+RR+ +S S +RS R
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 642
Query: 465 FKCRSSKK 442
RS +
Sbjct: 643 RSGRSRSR 650
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPL---KCQYQTLTKSSR-KSLT 535
R ++P + ++ P + RS S +P R RS +R+P + + +T + R +S T
Sbjct: 614 RSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRT 673
Query: 534 PSRRKCLMKSKCLL---TSPTRSTRRFKCRS 451
P+RR +S+ S +R+ RR + RS
Sbjct: 674 PARRSGRSRSRTPARRGRSRSRTPRRGRSRS 704
Score = 29.9 bits (64), Expect = 9.5
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR--KSLTPS 529
R ++P + S+ PT+ RS S P R + RS +R+P + + +T + R +S +P+
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPA 641
Query: 528 RRKCLMKSK 502
RR +S+
Sbjct: 642 RRSGRSRSR 650
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 642 RSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR-KSLTPSRRKCLMKSKCLLTSPTRSTRR 466
RS S P R + RS T + + + +T + R +S TP+RR+ +S S +RS R
Sbjct: 548 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 607
Query: 465 FKCRSSKK 442
RS +
Sbjct: 608 RSGRSRSR 615
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPL---KCQYQTLTKSSR-KSLT 535
R ++P + ++ P + RS S +P R RS +R+P + + +T + R +S T
Sbjct: 579 RSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRT 638
Query: 534 PSRRKCLMKSKCLL---TSPTRSTRRFKCRS 451
P+RR +S+ S +R+ RR + RS
Sbjct: 639 PARRSGRSRSRTPARRGRSRSRTPRRGRSRS 669
Score = 29.9 bits (64), Expect = 9.5
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR--KSLTPS 529
R ++P + S+ PT+ RS S P R + RS +R+P + + +T + R +S +P+
Sbjct: 548 RSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPA 606
Query: 528 RRKCLMKSK 502
RR +S+
Sbjct: 607 RRSGRSRSR 615
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 642 RSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR-KSLTPSRRKCLMKSKCLLTSPTRSTRR 466
RS S P R + RS T + + + +T + R +S TP+RR+ +S S +RS R
Sbjct: 373 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 432
Query: 465 FKCRSSKK 442
RS +
Sbjct: 433 RSGRSRSR 440
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPL---KCQYQTLTKSSR-KSLT 535
R ++P + ++ P + RS S +P R RS +R+P + + +T + R +S T
Sbjct: 404 RSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRT 463
Query: 534 PSRRKCLMKSKCLL---TSPTRSTRRFKCRS 451
P+RR +S+ S +R+ RR + RS
Sbjct: 464 PARRSGRSRSRTPARRGRSRSRTPRRGRSRS 494
Score = 29.9 bits (64), Expect = 9.5
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR--KSLTPS 529
R ++P + S+ PT+ RS S P R + RS +R+P + + +T + R +S +P+
Sbjct: 373 RSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPA 431
Query: 528 RRKCLMKSK 502
RR +S+
Sbjct: 432 RRSGRSRSR 440
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 642 RSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR-KSLTPSRRKCLMKSKCLLTSPTRSTRR 466
RS S P R + RS T + + + +T + R +S TP+RR+ +S S +RS R
Sbjct: 631 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 690
Query: 465 FKCRSSKK 442
RS +
Sbjct: 691 RSGRSRSR 698
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPL---KCQYQTLTKSSR-KSLT 535
R ++P + ++ P + RS S +P R RS +R+P + + +T + R +S T
Sbjct: 662 RSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRT 721
Query: 534 PSRRKCLMKSKCLL---TSPTRSTRRFKCRS 451
P+RR +S+ S +R+ RR + RS
Sbjct: 722 PARRSGRSRSRTPARRGRSRSRTPRRGRSRS 752
Score = 29.9 bits (64), Expect = 9.5
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 702 RPMLKSPTQ*PYTSQCPTKLRSLSTNPTRSK*RSPTRSPLKCQYQTLTKSSR--KSLTPS 529
R ++P + S+ PT+ RS S P R + RS +R+P + + +T + R +S +P+
Sbjct: 631 RSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPA 689
Query: 528 RRKCLMKSK 502
RR +S+
Sbjct: 690 RRSGRSRSR 698
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,046,638
Number of Sequences: 237096
Number of extensions: 1706037
Number of successful extensions: 7752
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7732
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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