Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2259
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 53 3e-07
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 53 3e-07
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 48 7e-06
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 48 7e-06
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 44 2e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 41 0.001
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 40 0.003
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 36 0.032
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 36 0.032
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 36 0.032
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 35 0.096
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 33 0.39
M19692-1|AAA28934.1| 1520|Drosophila melanogaster protein ( D.me... 31 0.90
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 31 0.90
AY058497-1|AAL13726.1| 1249|Drosophila melanogaster LD03455p pro... 31 0.90
AE014296-2776|AAF49431.2| 1620|Drosophila melanogaster CG4032-PA... 31 0.90
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 31 1.6
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 31 1.6
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 31 1.6
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 31 1.6
AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-P... 29 3.6
AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-P... 29 3.6
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 29 4.8
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 53.2 bits (122), Expect = 3e-07
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +3
Query: 18 SARGGGTVIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIASVYLPPDKIVLSS 194
++RGG VI R H PL P ++ + + R+ L T + +A+VYLPP + +
Sbjct: 64 NSRGGSAVIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVD 120
Query: 195 DIEALLG-MGSSVILAGDLNCKHIRWNSHTTTPNG 296
D +++ +G+ I GD N KH W + + P G
Sbjct: 121 DFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRG 155
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 53.2 bits (122), Expect = 3e-07
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +3
Query: 18 SARGGGTVIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIASVYLPPDKIVLSS 194
++RGG VI R H PL P ++ + + R+ L T + +A+VYLPP + +
Sbjct: 64 NSRGGSAVIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVD 120
Query: 195 DIEALLG-MGSSVILAGDLNCKHIRWNSHTTTPNG 296
D +++ +G+ I GD N KH W + + P G
Sbjct: 121 DFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRG 155
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 48.4 bits (110), Expect = 7e-06
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 30 GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD-IEA 206
GGT I R + A +++A+ I L + + +A+VY PP VL + ++
Sbjct: 65 GGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQFLDF 124
Query: 207 LLGMGSSVILAGDLNCKHIRWNSHTTTPNG 296
+G I AGD N KH W S P G
Sbjct: 125 FQALGPHFIAAGDYNAKHTHWGSRLVNPKG 154
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 334 DIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIE 447
D V+P +PT++P ++ PD++D A+ KN++ L E
Sbjct: 169 DHVSPGSPTYWPSDLNKLPDLIDFAVTKNISRSLVKAE 206
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 48.4 bits (110), Expect = 7e-06
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 1/123 (0%)
Frame = +3
Query: 30 GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEAL 209
GG I + +L PL P A A ++ + I T PI +VY PP + + + +
Sbjct: 66 GGAAILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTTDEFKDI 124
Query: 210 LG-MGSSVILAGDLNCKHIRWNSHTTTPNGXXXXXXXXXXXXXXXXSANPDSLPAKYRAS 386
L + I+AGD N H W + + G + P P R S
Sbjct: 125 LEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGS 184
Query: 387 PGY 395
PGY
Sbjct: 185 PGY 187
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 81 PPALANIEASV-CR-ISLTGHAPIVIASVYLPPDKIVLSSDI-EALLGMGSSVILAGDLN 251
P NI +S+ C + L I I + Y+PP +I SSDI E L + S IL GDLN
Sbjct: 78 PHTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISEILQNLNGSTILLGDLN 137
Query: 252 CKHIRWNSHTTTPNG 296
W S T G
Sbjct: 138 SWSPLWGSPRTNTRG 152
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 150 IASVYLPPDKIVLSSD--IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNG 296
+A+VY PP + +S D +E +G I AGD N KH W S TP G
Sbjct: 104 LAAVYCPP-RFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKG 153
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 334 DIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIE 447
D V+P PT++P + PD++D A+ K+V + + E
Sbjct: 168 DYVSPGKPTYWPADPRKIPDLIDFAITKHVPRNMVTAE 205
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 150 IASVYLPPDKIVLSSD--IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNG 296
+A+VY PP + +S D +E +G I AGD N KH W S +P G
Sbjct: 104 LAAVYCPP-RFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKG 153
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 334 DIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIE 447
D V+P PT++P + PD++D A+ K+V + + E
Sbjct: 168 DYVSPGKPTYWPADPRKIPDLIDFAITKHVPRNMVTAE 205
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 36.3 bits (80), Expect = 0.032
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 90 LANIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDLNCKHI 263
+A I +S R +T API VY L + E LL S IL GD NCKH
Sbjct: 104 IALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHR 163
Query: 264 RWNSHTTTPNG 296
W ++ + G
Sbjct: 164 LWGNYLSCARG 174
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 36.3 bits (80), Expect = 0.032
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 90 LANIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDLNCKHI 263
+A I +S R +T API VY L + E LL S IL GD NCKH
Sbjct: 104 IALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHR 163
Query: 264 RWNSHTTTPNG 296
W ++ + G
Sbjct: 164 LWGNYLSCARG 174
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 36.3 bits (80), Expect = 0.032
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 90 LANIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDLNCKHI 263
+A I +S R +T API VY L + E LL S IL GD NCKH
Sbjct: 104 IALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHR 163
Query: 264 RWNSHTTTPNG 296
W ++ + G
Sbjct: 164 LWGNYLSCARG 174
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 34.7 bits (76), Expect = 0.096
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 30 GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPD-KIVLSSDIEA 206
GG ++ R L P +I+ S +++ TG + +++Y P +I +
Sbjct: 67 GGVAVFVRTTLRHFPQRVIETRHIQLSSVKVA-TGLGDLQFSAIYCSPSTRIEERHFTDI 125
Query: 207 LLGMGSSVILAGDLNCKHIRWNSHTTTPNG 296
+ G ++ GD N +H W +P G
Sbjct: 126 IRACGQRYLVGGDWNARHWLWGDTCNSPRG 155
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 32.7 bits (71), Expect = 0.39
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Frame = +3
Query: 144 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRW 269
IVIASVY PP L +D+ E LG + IL GD N KH +W
Sbjct: 113 IVIASVYCPPSLRWLPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQW 161
>M19692-1|AAA28934.1| 1520|Drosophila melanogaster protein (
D.melanogaster tyrosinekinase gene, exons 3 to 10 (with a
region homologous tothe Abelson oncogene). ).
Length = 1520
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -3
Query: 572 ARLMPKRVPIPPQSW*RERKSGSATELHN 486
ARL PK PIPPQ R SG T +N
Sbjct: 990 ARLNPKASPIPPQQMIRSNSSGGVTMQNN 1018
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 31.5 bits (68), Expect = 0.90
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 9/98 (9%)
Frame = +3
Query: 3 RNDRLSARGGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPD 176
+N S RGG I H P++ + + + + IVIASVY PP
Sbjct: 76 QNPASSKRGGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPS 135
Query: 177 KIVLS---SDI----EALLGMGSSVILAGDLNCKHIRW 269
+D+ E +G + +IL GD N KH +W
Sbjct: 136 LSWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQW 173
>AY058497-1|AAL13726.1| 1249|Drosophila melanogaster LD03455p
protein.
Length = 1249
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -3
Query: 572 ARLMPKRVPIPPQSW*RERKSGSATELHN 486
ARL PK PIPPQ R SG T +N
Sbjct: 602 ARLNPKASPIPPQQMIRSNSSGGVTMQNN 630
>AE014296-2776|AAF49431.2| 1620|Drosophila melanogaster CG4032-PA
protein.
Length = 1620
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -3
Query: 572 ARLMPKRVPIPPQSW*RERKSGSATELHN 486
ARL PK PIPPQ R SG T +N
Sbjct: 973 ARLNPKASPIPPQQMIRSNSSGGVTMQNN 1001
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = +3
Query: 144 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRW 269
IVIASVY PP +D+ E LG + IL GD N KH +W
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQW 161
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = +3
Query: 144 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRW 269
IVIASVY PP +D+ E LG + IL GD N KH +W
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQW 161
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = +3
Query: 144 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRW 269
IVIASVY PP +D+ E LG + IL GD N KH +W
Sbjct: 75 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQW 123
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = +3
Query: 144 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRW 269
IVIASVY PP +D+ E LG + IL GD N KH +W
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQW 161
>AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-PB,
isoform B protein.
Length = 653
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 159 VYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTP 290
V+ PD LSSD+ LLG+ + + + L C + S T P
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYP 271
>AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-PA,
isoform A protein.
Length = 804
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 159 VYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTP 290
V+ PD LSSD+ LLG+ + + + L C + S T P
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYP 271
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +3
Query: 99 IEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSV-ILAGDLNCKHIRWNS 275
I+ I++ + I S Y+ P K + + + + + ++ GD N H W S
Sbjct: 82 IDIEAIAINIESKLKLNIFSTYISPTKNITNQTLHNTFNIQQTPSLITGDFNGWHHPWGS 141
Query: 276 HTTTPNG 296
TT G
Sbjct: 142 PTTNKRG 148
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,982,054
Number of Sequences: 53049
Number of extensions: 556754
Number of successful extensions: 1311
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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