Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2259
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   0.98 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   1.7  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   9.2  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   9.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   9.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   9.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.2  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +2

Query: 425 LCAYTRSK*FSELDSDHPSRRYEARSRSPISVPVTRTGVE 544
           +CAY + K   ++DS  P      R++  +++ +   G E
Sbjct: 335 MCAYAKGKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAE 374


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 471 TTRPVVMKLGRAPRFPFPSPGLGWNWHTLGHQPG 572
           TT P   K       P+P+    W WHT+G+  G
Sbjct: 215 TTVPKHSKTKSPKLRPYPN----WEWHTVGNCDG 244


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 531 GLGWNWHTL 557
           G  WNW+TL
Sbjct: 23  GSNWNWNTL 31


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 531 GLGWNWHTL 557
           G  WNW+TL
Sbjct: 67  GSNWNWNTL 75


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 531 GLGWNWHTL 557
           G  WNW+TL
Sbjct: 67  GSNWNWNTL 75


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 531 GLGWNWHTL 557
           G  WNW+TL
Sbjct: 67  GSNWNWNTL 75


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 522  PSPGLGWNWHTLGHQPGWNL 581
            P P   WN   LG+  G+ L
Sbjct: 999  PPPREDWNGEILGYYVGYRL 1018


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 105 ASVCRISLTGHAPIVIASVYLPP 173
           ASV   +LTG  P ++    LPP
Sbjct: 469 ASVVAAALTGTYPTLLPQWCLPP 491


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,904
Number of Sequences: 438
Number of extensions: 3556
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)