Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2258
(510 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66699-1|CAA47244.1| 92|Homo sapiens ribosomal protein L37a pr... 152 8e-37
L06499-1|AAA60280.1| 92|Homo sapiens ribosomal protein L37a pr... 152 8e-37
CR542152-1|CAG46949.1| 92|Homo sapiens RPL37A protein. 152 8e-37
BC082239-1|AAH82239.1| 92|Homo sapiens ribosomal protein L37a ... 152 8e-37
BC067789-1|AAH67789.1| 92|Homo sapiens ribosomal protein L37a ... 152 8e-37
BC016748-1|AAH16748.1| 92|Homo sapiens ribosomal protein L37a ... 152 8e-37
BC014262-1|AAH14262.1| 92|Homo sapiens ribosomal protein L37a ... 152 8e-37
AC073321-2|AAY15078.1| 92|Homo sapiens unknown protein. 152 8e-37
BC000555-1|AAH00555.2| 91|Homo sapiens RPL37A protein protein. 150 3e-36
BC063476-1|AAH63476.1| 72|Homo sapiens RPL37A protein protein. 130 3e-30
AF217994-1|AAG17236.1| 353|Homo sapiens unknown protein. 29 7.1
AF174595-1|AAF04516.1| 173|Homo sapiens F-box protein Fbx3 prot... 29 7.1
>X66699-1|CAA47244.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 8e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = -1
Query: 321 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 142
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 141 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 52
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>L06499-1|AAA60280.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 8e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = -1
Query: 321 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 142
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 141 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 52
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>CR542152-1|CAG46949.1| 92|Homo sapiens RPL37A protein.
Length = 92
Score = 152 bits (368), Expect = 8e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = -1
Query: 321 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 142
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 141 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 52
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC082239-1|AAH82239.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 8e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = -1
Query: 321 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 142
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 141 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 52
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC067789-1|AAH67789.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 8e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = -1
Query: 321 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 142
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 141 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 52
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC016748-1|AAH16748.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 8e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = -1
Query: 321 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 142
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 141 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 52
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC014262-1|AAH14262.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 8e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = -1
Query: 321 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 142
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 141 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 52
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>AC073321-2|AAY15078.1| 92|Homo sapiens unknown protein.
Length = 92
Score = 152 bits (368), Expect = 8e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = -1
Query: 321 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 142
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 141 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 52
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC000555-1|AAH00555.2| 91|Homo sapiens RPL37A protein protein.
Length = 91
Score = 150 bits (363), Expect = 3e-36
Identities = 65/89 (73%), Positives = 77/89 (86%)
Frame = -1
Query: 318 AKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCK 139
AKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCM 60
Query: 138 RTVAGGAWVFSTTAASSCRSAVRRLREVK 52
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 KTVAGGAWTYNTTSAVTVKSAIRRLKELK 89
>BC063476-1|AAH63476.1| 72|Homo sapiens RPL37A protein protein.
Length = 72
Score = 130 bits (314), Expect = 3e-30
Identities = 56/71 (78%), Positives = 61/71 (85%)
Frame = -1
Query: 321 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 142
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 141 KRTVAGGAWVF 109
+TVAGGAW +
Sbjct: 61 MKTVAGGAWTY 71
>AF217994-1|AAG17236.1| 353|Homo sapiens unknown protein.
Length = 353
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 328 KPLRYKS*QRKEKQKNSRGGPEPNS 402
K + K ++K+K+KNSRGGP P +
Sbjct: 36 KKKKKKKKKKKKKKKNSRGGPVPGN 60
>AF174595-1|AAF04516.1| 173|Homo sapiens F-box protein Fbx3
protein.
Length = 173
Score = 29.5 bits (63), Expect = 7.1
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 322 NGQTYQKGWNYWQIWHTL 269
NGQ W YW+ WH L
Sbjct: 148 NGQKLVGSWGYWEAWHCL 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,427,628
Number of Sequences: 237096
Number of extensions: 1604106
Number of successful extensions: 4430
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4430
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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