BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2250
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021214-1|AAX33362.1| 373|Drosophila melanogaster RH73259p pro... 33 0.32
AE014134-2431|AAF53357.3| 373|Drosophila melanogaster CG16886-P... 33 0.32
AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA ... 31 0.97
BT023847-1|AAZ86768.1| 921|Drosophila melanogaster IP13961p pro... 30 2.9
AE014134-1425|AAF52617.1| 921|Drosophila melanogaster CG8419-PA... 30 2.9
AY061181-1|AAL28729.1| 158|Drosophila melanogaster LD14807p pro... 29 3.9
BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p pro... 29 5.1
AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD2333... 29 5.1
AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB... 29 5.1
AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA... 29 5.1
BT023955-1|ABB36459.1| 808|Drosophila melanogaster AT31092p pro... 28 9.0
AY061161-1|AAL28709.1| 430|Drosophila melanogaster LD12812p pro... 28 9.0
AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p pro... 28 9.0
AE014296-3241|AAF49098.3| 1059|Drosophila melanogaster CG32217-P... 28 9.0
AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC... 28 9.0
AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB... 28 9.0
AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA... 28 9.0
>BT021214-1|AAX33362.1| 373|Drosophila melanogaster RH73259p
protein.
Length = 373
Score = 33.1 bits (72), Expect = 0.32
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 569 PLKRKFMFPVEVHVPAPYP 625
P+++K PV+VHVPAPYP
Sbjct: 170 PVEKKVHVPVKVHVPAPYP 188
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 593 PVEVHVPAPYP 625
PV+VHVPAPYP
Sbjct: 160 PVKVHVPAPYP 170
>AE014134-2431|AAF53357.3| 373|Drosophila melanogaster CG16886-PA
protein.
Length = 373
Score = 33.1 bits (72), Expect = 0.32
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 569 PLKRKFMFPVEVHVPAPYP 625
P+++K PV+VHVPAPYP
Sbjct: 170 PVEKKVHVPVKVHVPAPYP 188
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 593 PVEVHVPAPYP 625
PV+VHVPAPYP
Sbjct: 160 PVKVHVPAPYP 170
>AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA
protein.
Length = 1314
Score = 31.5 bits (68), Expect = 0.97
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +2
Query: 326 SLPRRKAHPLPGRKENPLPRESARSPT-LPRCQTC--PLPS*RDCQGTSSRTATLPSRKE 496
+LP ++ G K P PR S ++PT LP P PS R Q T R R
Sbjct: 865 TLPLSRSRLSAGVKPTPAPRTSLQTPTPLPETTVAKDPTPSKRKSQPTVRREYPSLDRLV 924
Query: 497 GALPSTCPSRQTR 535
+ T P + +R
Sbjct: 925 ASTTGTIPKKNSR 937
>BT023847-1|AAZ86768.1| 921|Drosophila melanogaster IP13961p protein.
Length = 921
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +2
Query: 446 DCQGTSSRTATLPSRKEGALPSTCPSRQTRPRQGI---CARTLPPLKRKFMFPVEVHVP 613
D QGT T T+ R P T +RQ RP GI C+ R M E H+P
Sbjct: 824 DAQGTLILTITINDRPIKGGPFTFQARQVRPHTGIYHCCSFCSGKGNRNVMCSCEGHMP 882
>AE014134-1425|AAF52617.1| 921|Drosophila melanogaster CG8419-PA
protein.
Length = 921
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +2
Query: 446 DCQGTSSRTATLPSRKEGALPSTCPSRQTRPRQGI---CARTLPPLKRKFMFPVEVHVP 613
D QGT T T+ R P T +RQ RP GI C+ R M E H+P
Sbjct: 824 DAQGTLILTITINDRPIKGGPFTFQARQVRPHTGIYHCCSFCSGKGNRNVMCSCEGHMP 882
>AY061181-1|AAL28729.1| 158|Drosophila melanogaster LD14807p
protein.
Length = 158
Score = 29.5 bits (63), Expect = 3.9
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 332 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPS 511
PRR+ +P + + LPR + T PR + P R Q + L R++ LP+
Sbjct: 10 PRRQLQQMPRQLGHLLPRRQLPAMTAPRKKRRPR---RQLQQRPRQLRQLLPRRQ--LPA 64
Query: 512 -TCPSRQTRPRQGICARTLPPLKRK 583
T P ++ RPR+ LPP +R+
Sbjct: 65 MTAPRKKRRPRR------LPPQQRR 83
>BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p
protein.
Length = 1341
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 335 RRKAHPLPGRKENPLPRESARSPTLPRCQ 421
RR PLP +E+PLP + +P RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323
>AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD23336
protein.
Length = 1239
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 335 RRKAHPLPGRKENPLPRESARSPTLPRCQ 421
RR PLP +E+PLP + +P RC+
Sbjct: 193 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 221
>AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB,
isoform B protein.
Length = 1296
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 335 RRKAHPLPGRKENPLPRESARSPTLPRCQ 421
RR PLP +E+PLP + +P RC+
Sbjct: 250 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 278
>AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA,
isoform A protein.
Length = 1341
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 335 RRKAHPLPGRKENPLPRESARSPTLPRCQ 421
RR PLP +E+PLP + +P RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323
>BT023955-1|ABB36459.1| 808|Drosophila melanogaster AT31092p
protein.
Length = 808
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 400 PNPTPLSNMSLTQLKRLSRYQFTYRN-PTQSKRRCLTQYMSQSTDPSPSRYM 552
P P+ S S+ Q + + Q + P+Q +++ QY Q+ PSPS+ +
Sbjct: 510 PPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHPSPSQQL 561
>AY061161-1|AAL28709.1| 430|Drosophila melanogaster LD12812p
protein.
Length = 430
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 400 PNPTPLSNMSLTQLKRLSRYQFTYRN-PTQSKRRCLTQYMSQSTDPSPSRYM 552
P P+ S S+ Q + + Q + P+Q +++ QY Q+ PSPS+ +
Sbjct: 126 PPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHPSPSQQL 177
>AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p
protein.
Length = 607
Score = 28.3 bits (60), Expect = 9.0
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 317 SSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 496
S L RR++ PLP + + + + LPR + P P R + S ++ S +
Sbjct: 215 SRSPLGRRRSPPLPPPSSSAMEKRGPVAHILPRSKRPPSPPPRHSMRSRSNSSMSTSSDD 274
Query: 497 GALPSTC-PSRQTRPRQGICARTLPPLKR 580
S C PS + R R R+ PP R
Sbjct: 275 SC--SLCSPSHRHRSRSR-GPRSPPPKPR 300
>AE014296-3241|AAF49098.3| 1059|Drosophila melanogaster CG32217-PA
protein.
Length = 1059
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 400 PNPTPLSNMSLTQLKRLSRYQFTYRN-PTQSKRRCLTQYMSQSTDPSPSRYM 552
P P+ S S+ Q + + Q + P+Q +++ QY Q+ PSPS+ +
Sbjct: 755 PPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHPSPSQQL 806
>AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC,
isoform C protein.
Length = 567
Score = 28.3 bits (60), Expect = 9.0
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 317 SSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 496
S L RR++ PLP + + + + LPR + P P R + S ++ S +
Sbjct: 175 SRSPLGRRRSPPLPPPSSSAMEKRGPVAHILPRSKRPPSPPPRHSMRSRSNSSMSTSSDD 234
Query: 497 GALPSTC-PSRQTRPRQGICARTLPPLKR 580
S C PS + R R R+ PP R
Sbjct: 235 SC--SLCSPSHRHRSRSR-GPRSPPPKPR 260
>AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB,
isoform B protein.
Length = 607
Score = 28.3 bits (60), Expect = 9.0
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 317 SSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 496
S L RR++ PLP + + + + LPR + P P R + S ++ S +
Sbjct: 215 SRSPLGRRRSPPLPPPSSSAMEKRGPVAHILPRSKRPPSPPPRHSMRSRSNSSMSTSSDD 274
Query: 497 GALPSTC-PSRQTRPRQGICARTLPPLKR 580
S C PS + R R R+ PP R
Sbjct: 275 SC--SLCSPSHRHRSRSR-GPRSPPPKPR 300
>AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA,
isoform A protein.
Length = 607
Score = 28.3 bits (60), Expect = 9.0
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 317 SSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 496
S L RR++ PLP + + + + LPR + P P R + S ++ S +
Sbjct: 215 SRSPLGRRRSPPLPPPSSSAMEKRGPVAHILPRSKRPPSPPPRHSMRSRSNSSMSTSSDD 274
Query: 497 GALPSTC-PSRQTRPRQGICARTLPPLKR 580
S C PS + R R R+ PP R
Sbjct: 275 SC--SLCSPSHRHRSRSR-GPRSPPPKPR 300
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,577,304
Number of Sequences: 53049
Number of extensions: 403360
Number of successful extensions: 1371
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -