Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2245
(708 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061115-1|AAL28663.1| 299|Drosophila melanogaster LD09945p pro... 201 9e-52
AL009191-3|CAA15685.1| 299|Drosophila melanogaster EG:39E1.2 pr... 201 9e-52
AE014298-303|AAF45700.1| 299|Drosophila melanogaster CG3587-PA ... 201 9e-52
BT023711-1|AAY85111.1| 307|Drosophila melanogaster GH25024p pro... 33 0.38
AE014296-2269|AAF49823.2| 307|Drosophila melanogaster CG10222-P... 33 0.38
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 33 0.50
AY071467-1|AAL49089.1| 524|Drosophila melanogaster RE54684p pro... 30 2.7
AY069392-1|AAL39537.1| 435|Drosophila melanogaster LD09936p pro... 30 2.7
AE013599-85|AAM68363.2| 435|Drosophila melanogaster CG30438-PA,... 30 2.7
AE013599-84|AAM68366.3| 524|Drosophila melanogaster CG30438-PD,... 30 2.7
AE013599-83|AAM68365.3| 524|Drosophila melanogaster CG30438-PC,... 30 2.7
AE013599-82|AAM68364.3| 524|Drosophila melanogaster CG30438-PB,... 30 2.7
AY052144-1|AAK93568.1| 947|Drosophila melanogaster SD10334p pro... 29 8.2
AY052107-1|AAK93531.1| 292|Drosophila melanogaster SD05444p pro... 29 8.2
AJ564676-1|CAD92830.1| 122|Drosophila melanogaster gag protein ... 29 8.2
AJ564675-1|CAD92829.1| 120|Drosophila melanogaster gag protein ... 29 8.2
AE014298-2892|AAF48985.2| 292|Drosophila melanogaster CG12788-P... 29 8.2
AE014297-693|AAF54185.1| 947|Drosophila melanogaster CG2708-PA ... 29 8.2
>AY061115-1|AAL28663.1| 299|Drosophila melanogaster LD09945p
protein.
Length = 299
Score = 201 bits (490), Expect = 9e-52
Identities = 103/193 (53%), Positives = 133/193 (68%), Gaps = 14/193 (7%)
Frame = +1
Query: 22 MPLIIICGTPVSGKTTRAKELKQFFEEKHGKTVEIVSEDEAIAKLGYEKNSMFLDSQKEK 201
MPL++I G P SGK+TRA++L+ F E+ G+ V ++SE+EA+ K G+ KNS DSQKEK
Sbjct: 1 MPLVVITGLPASGKSTRARQLRDHFVER-GRKVHLISENEAVPKAGFGKNSHTGDSQKEK 59
Query: 202 RVRGYLKSEAIRLIGKDNVVILDGSNYIKGYRYELYCASKASKSTQCTIYTLRNHEEAWQ 381
VR LKSEA R + ++++VILD NYIKGYRYELYC SK S++TQCT++T EEAW
Sbjct: 60 VVRSDLKSEASRHLNQEDLVILDAGNYIKGYRYELYCMSKVSRTTQCTVFTCIPQEEAWT 119
Query: 382 ANQKRIS-------------TDNSD-QYTEEVFNALTRLRFEEPNSNNRWDSPLFTVLPT 519
N +R + DNSD YT E F+AL + R+EEP SNNRWDSPL VLP
Sbjct: 120 FNSQRTAPDELPGDSERVQPVDNSDVPYTRETFDALCQ-RYEEPQSNNRWDSPLVVVLPK 178
Query: 520 DNIDLENIYKVLF 558
D +D+E IYK L+
Sbjct: 179 DTLDMEAIYKALY 191
>AL009191-3|CAA15685.1| 299|Drosophila melanogaster EG:39E1.2
protein.
Length = 299
Score = 201 bits (490), Expect = 9e-52
Identities = 103/193 (53%), Positives = 133/193 (68%), Gaps = 14/193 (7%)
Frame = +1
Query: 22 MPLIIICGTPVSGKTTRAKELKQFFEEKHGKTVEIVSEDEAIAKLGYEKNSMFLDSQKEK 201
MPL++I G P SGK+TRA++L+ F E+ G+ V ++SE+EA+ K G+ KNS DSQKEK
Sbjct: 1 MPLVVITGLPASGKSTRARQLRDHFVER-GRKVHLISENEAVPKAGFGKNSHTGDSQKEK 59
Query: 202 RVRGYLKSEAIRLIGKDNVVILDGSNYIKGYRYELYCASKASKSTQCTIYTLRNHEEAWQ 381
VR LKSEA R + ++++VILD NYIKGYRYELYC SK S++TQCT++T EEAW
Sbjct: 60 VVRSDLKSEASRHLNQEDLVILDAGNYIKGYRYELYCMSKVSRTTQCTVFTCIPQEEAWT 119
Query: 382 ANQKRIS-------------TDNSD-QYTEEVFNALTRLRFEEPNSNNRWDSPLFTVLPT 519
N +R + DNSD YT E F+AL + R+EEP SNNRWDSPL VLP
Sbjct: 120 FNSQRTAPDELPGDSERVQPVDNSDVPYTRETFDALCQ-RYEEPQSNNRWDSPLVVVLPK 178
Query: 520 DNIDLENIYKVLF 558
D +D+E IYK L+
Sbjct: 179 DTLDMEAIYKALY 191
>AE014298-303|AAF45700.1| 299|Drosophila melanogaster CG3587-PA
protein.
Length = 299
Score = 201 bits (490), Expect = 9e-52
Identities = 103/193 (53%), Positives = 133/193 (68%), Gaps = 14/193 (7%)
Frame = +1
Query: 22 MPLIIICGTPVSGKTTRAKELKQFFEEKHGKTVEIVSEDEAIAKLGYEKNSMFLDSQKEK 201
MPL++I G P SGK+TRA++L+ F E+ G+ V ++SE+EA+ K G+ KNS DSQKEK
Sbjct: 1 MPLVVITGLPASGKSTRARQLRDHFVER-GRKVHLISENEAVPKAGFGKNSHTGDSQKEK 59
Query: 202 RVRGYLKSEAIRLIGKDNVVILDGSNYIKGYRYELYCASKASKSTQCTIYTLRNHEEAWQ 381
VR LKSEA R + ++++VILD NYIKGYRYELYC SK S++TQCT++T EEAW
Sbjct: 60 VVRSDLKSEASRHLNQEDLVILDAGNYIKGYRYELYCMSKVSRTTQCTVFTCIPQEEAWT 119
Query: 382 ANQKRIS-------------TDNSD-QYTEEVFNALTRLRFEEPNSNNRWDSPLFTVLPT 519
N +R + DNSD YT E F+AL + R+EEP SNNRWDSPL VLP
Sbjct: 120 FNSQRTAPDELPGDSERVQPVDNSDVPYTRETFDALCQ-RYEEPQSNNRWDSPLVVVLPK 178
Query: 520 DNIDLENIYKVLF 558
D +D+E IYK L+
Sbjct: 179 DTLDMEAIYKALY 191
>BT023711-1|AAY85111.1| 307|Drosophila melanogaster GH25024p
protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.38
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 34 IICGTPVSGKTTRAKELKQFFEEKHGKTVEIVSEDEAIAKLGYE 165
+I G P SGKTT E +F+ E G+ V +V+ D A + YE
Sbjct: 19 LIIGPPGSGKTTYCGEALKFYREL-GRQVGVVNLDPANENMSYE 61
>AE014296-2269|AAF49823.2| 307|Drosophila melanogaster CG10222-PA
protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.38
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 34 IICGTPVSGKTTRAKELKQFFEEKHGKTVEIVSEDEAIAKLGYE 165
+I G P SGKTT E +F+ E G+ V +V+ D A + YE
Sbjct: 19 LIIGPPGSGKTTYCGEALKFYREL-GRQVGVVNLDPANENMSYE 61
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 32.7 bits (71), Expect = 0.50
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +1
Query: 238 LIGKDNVVILDGSNYIKGYRYELYCASKASKSTQCTIYTLRNHEEAWQANQKRISTDNSD 417
L D V+ + S + + L + ++ S I T+ +++ +NQ IS NS
Sbjct: 32 LFSDDEVLSISSSPEQRSSPFYLNISPMSNGSDNSQINTIIFNQKKLPSNQANISLKNSS 91
Query: 418 QYTEEVFNALTRLRFEEPNSNNRWDSPL 501
++ ++L+ + E N+NN PL
Sbjct: 92 GAAIKIVSSLSHKKKENSNTNNAQKDPL 119
>AY071467-1|AAL49089.1| 524|Drosophila melanogaster RE54684p
protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 577 WWRFLFKIELYIYFLNLYCLLAEL*RVDYPID 482
WW++ + +Y + LY L+ L R+D+P +
Sbjct: 470 WWQYYLLDVVAVYLILLYVLILALRRIDFPYE 501
>AY069392-1|AAL39537.1| 435|Drosophila melanogaster LD09936p
protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 577 WWRFLFKIELYIYFLNLYCLLAEL*RVDYPID 482
WW++ + +Y + LY L+ L R+D+P +
Sbjct: 381 WWQYYLLDVVAVYLILLYVLILALRRIDFPYE 412
>AE013599-85|AAM68363.2| 435|Drosophila melanogaster CG30438-PA,
isoform A protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 577 WWRFLFKIELYIYFLNLYCLLAEL*RVDYPID 482
WW++ + +Y + LY L+ L R+D+P +
Sbjct: 381 WWQYYLLDVVAVYLILLYVLILALRRIDFPYE 412
>AE013599-84|AAM68366.3| 524|Drosophila melanogaster CG30438-PD,
isoform D protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 577 WWRFLFKIELYIYFLNLYCLLAEL*RVDYPID 482
WW++ + +Y + LY L+ L R+D+P +
Sbjct: 470 WWQYYLLDVVAVYLILLYVLILALRRIDFPYE 501
>AE013599-83|AAM68365.3| 524|Drosophila melanogaster CG30438-PC,
isoform C protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 577 WWRFLFKIELYIYFLNLYCLLAEL*RVDYPID 482
WW++ + +Y + LY L+ L R+D+P +
Sbjct: 470 WWQYYLLDVVAVYLILLYVLILALRRIDFPYE 501
>AE013599-82|AAM68364.3| 524|Drosophila melanogaster CG30438-PB,
isoform B protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 577 WWRFLFKIELYIYFLNLYCLLAEL*RVDYPID 482
WW++ + +Y + LY L+ L R+D+P +
Sbjct: 470 WWQYYLLDVVAVYLILLYVLILALRRIDFPYE 501
>AY052144-1|AAK93568.1| 947|Drosophila melanogaster SD10334p
protein.
Length = 947
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 262 ILDGSNYIKGYRYELYCASKASKSTQCTIYTLRNHEEAWQANQKRISTDNSDQYTEE 432
+LD + ++ Y+YE S ST ++ R +E + K TD D+Y ++
Sbjct: 335 LLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAKARFTDQIDEYIKD 391
>AY052107-1|AAK93531.1| 292|Drosophila melanogaster SD05444p
protein.
Length = 292
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/86 (22%), Positives = 39/86 (45%)
Frame = +1
Query: 253 NVVILDGSNYIKGYRYELYCASKASKSTQCTIYTLRNHEEAWQANQKRISTDNSDQYTEE 432
++++ D + Y + RY+LY + S IY + + QAN R ++ + +
Sbjct: 97 HLILCDDNFYYRSMRYKLYQLCRDSGCIFGQIYMASSLDSCLQANSLR---SDATRVPVD 153
Query: 433 VFNALTRLRFEEPNSNNRWDSPLFTV 510
V + R E P+++ W+ T+
Sbjct: 154 VVRQMNE-RLEVPDTSEAWERNSLTL 178
>AJ564676-1|CAD92830.1| 122|Drosophila melanogaster gag protein
protein.
Length = 122
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 331 STQCTIYTLRNHEEAWQANQKRISTDNSDQYTEEVFNALTRLRFEEPNSNNRWDSPL 501
S I T+ +++ +NQ IS NS ++ ++L+ + E N+NN PL
Sbjct: 5 SDNSQINTIIFNQKKLPSNQANISLKNSSGAAIKIVSSLSHKKKENTNTNNAQKDPL 61
>AJ564675-1|CAD92829.1| 120|Drosophila melanogaster gag protein
protein.
Length = 120
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 331 STQCTIYTLRNHEEAWQANQKRISTDNSDQYTEEVFNALTRLRFEEPNSNNRWDSPL 501
S I T+ +++ +NQ IS NS ++ ++L+ + E N+NN PL
Sbjct: 5 SDNSQINTIIFNQKKLPSNQANISLKNSSGAAIKIVSSLSHKKKENTNTNNAQKDPL 61
>AE014298-2892|AAF48985.2| 292|Drosophila melanogaster CG12788-PA,
isoform A protein.
Length = 292
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/86 (22%), Positives = 39/86 (45%)
Frame = +1
Query: 253 NVVILDGSNYIKGYRYELYCASKASKSTQCTIYTLRNHEEAWQANQKRISTDNSDQYTEE 432
++++ D + Y + RY+LY + S IY + + QAN R ++ + +
Sbjct: 97 HLILCDDNFYYRSMRYKLYQLCRDSGCIFGQIYMASSLDSCLQANSLR---SDATRVPVD 153
Query: 433 VFNALTRLRFEEPNSNNRWDSPLFTV 510
V + R E P+++ W+ T+
Sbjct: 154 VVRQMNE-RLEVPDTSEAWERNSLTL 178
>AE014297-693|AAF54185.1| 947|Drosophila melanogaster CG2708-PA
protein.
Length = 947
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 262 ILDGSNYIKGYRYELYCASKASKSTQCTIYTLRNHEEAWQANQKRISTDNSDQYTEE 432
+LD + ++ Y+YE S ST ++ R +E + K TD D+Y ++
Sbjct: 335 LLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAKARFTDQIDEYIKD 391
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,307,312
Number of Sequences: 53049
Number of extensions: 565023
Number of successful extensions: 1514
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1508
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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