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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2243
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026215-8|AAB71317.1|  415|Caenorhabditis elegans Hypothetical ...    33   0.15 
U80442-4|AAB37667.1|  226|Caenorhabditis elegans Hypothetical pr...    32   0.44 
U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical pr...    31   0.59 
U39652-2|AAA80404.1|  817|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.       30   1.4  
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated...    30   1.4  
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated...    30   1.4  
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated...    30   1.4  
AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical ...    30   1.4  
U23523-10|AAP68941.1|  428|Caenorhabditis elegans Troponin t pro...    29   2.4  
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z83239-9|CAB05811.1|  517|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81099-4|CAB03189.1|  517|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U00025-4|AAN65312.1|  606|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U00025-3|AAA50619.1|  804|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AB110824-1|BAD80739.1|  606|Caenorhabditis elegans chondroitin p...    28   5.5  
AB110823-1|BAD80738.1|  804|Caenorhabditis elegans chondroitin p...    28   5.5  
U61953-3|AAC48071.3|  491|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U28734-1|AAB52603.2|  397|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AC006607-9|AAF60368.2|  995|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>AF026215-8|AAB71317.1|  415|Caenorhabditis elegans Hypothetical
           protein F09G2.9 protein.
          Length = 415

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
 Frame = +2

Query: 401 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 565
           KS E P  E K ++  V     +EPAA  E+ K   +  V E  KEE P++  +E   D 
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183

Query: 566 AAIIPNMVKKIDLAPTVESDAAAIPE 643
             +     K    AP  + ++ A  E
Sbjct: 184 PVVNTEEKKDAAEAPAADEESEAAEE 209


>U80442-4|AAB37667.1|  226|Caenorhabditis elegans Hypothetical
           protein T20F5.5 protein.
          Length = 226

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +2

Query: 431 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 607
           KSA  K+  P+ + ED++ T+  A+  E S + KP  T  E SAD    + ++  +  LA
Sbjct: 66  KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124

Query: 608 P 610
           P
Sbjct: 125 P 125


>U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical
           protein ZK84.1 protein.
          Length = 801

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 4/132 (3%)
 Frame = +2

Query: 278 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 457
           +++  PA  EA   D A  ++  A                A SS +P+     A    E 
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562

Query: 458 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID----LAPTVESD 625
           PA  P   +T   A  AE +    P+A +   +A +A   P      D     AP  E  
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETPAPAPAAEET 622

Query: 626 AAAIPEIKTSEA 661
            A  P ++ + A
Sbjct: 623 PAPAPAVEETPA 634



 Score = 29.9 bits (64), Expect = 1.8
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
 Frame = +2

Query: 398 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 571
           A+++E   A A +A+   E PA+ P   +T   A  AE +    P+A  T A  +  +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740

Query: 572 IIPNMVKKIDLAPTVESDAAAIPEIKTSEAA 664
             P +    D A + ++  A+     +S+A+
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDAS 771


>U39652-2|AAA80404.1|  817|Caenorhabditis elegans Hypothetical
           protein R07E4.5 protein.
          Length = 817

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +2

Query: 446 KVEEPAAQP-EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTV 616
           K+EE A +  E+ K ++Q+  A           D   S D   +IP  VK I   PT+
Sbjct: 435 KLEEHAVKKLEEEKDKLQSAAAPEDDSPASPPMDCPASPDMVPVIPQTVKIIPTVPTI 492


>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
           protein F52H3.7a protein.
          Length = 1245

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
 Frame = +2

Query: 422 AEAKSADIKVEEPAAQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMV 589
           A A+SA   VEE AA  E ++  V+    AT A  S  E+P A     +A+S    P   
Sbjct: 610 APAESAPASVEE-AAPSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEE 668

Query: 590 KKIDLAPT-VES--DAAAIPEIKTSEAA 664
            K + +PT +ES  D      + ++E+A
Sbjct: 669 HKDEASPTALESVEDVIEAVHVASTESA 696


>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
          Length = 6632

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
 Frame = +2

Query: 401  KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 577
            K S  PD + KS +   E+PA+  + +  EV++      KE+ P++   +  + +A  + 
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428

Query: 578  -PNMVKKIDLAPTVESDAAAIPEIKTSEAAR 667
             P   +K   +PT +  + + P  KT +  +
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVK 1459



 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +2

Query: 416  PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 583
            P  + KS +   E+PA+  +  KT  ++   E+     KE+ PS+   +   +S    P 
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850

Query: 584  MVKKIDLAPTVESDAAAIPEIKTSEA 661
              ++   +PT +      P+ K S++
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKS 1876


>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
            protein 89, isoform a protein.
          Length = 6632

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
 Frame = +2

Query: 401  KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 577
            K S  PD + KS +   E+PA+  + +  EV++      KE+ P++   +  + +A  + 
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428

Query: 578  -PNMVKKIDLAPTVESDAAAIPEIKTSEAAR 667
             P   +K   +PT +  + + P  KT +  +
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVK 1459



 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +2

Query: 416  PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 583
            P  + KS +   E+PA+  +  KT  ++   E+     KE+ PS+   +   +S    P 
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850

Query: 584  MVKKIDLAPTVESDAAAIPEIKTSEA 661
              ++   +PT +      P+ K S++
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKS 1876


>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
            protein 89, isoform g protein.
          Length = 7122

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
 Frame = +2

Query: 401  KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 577
            K S  PD + KS +   E+PA+  + +  EV++      KE+ P++   +  + +A  + 
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428

Query: 578  -PNMVKKIDLAPTVESDAAAIPEIKTSEAAR 667
             P   +K   +PT +  + + P  KT +  +
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVK 1459



 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +2

Query: 416  PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 583
            P  + KS +   E+PA+  +  KT  ++   E+     KE+ PS+   +   +S    P 
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850

Query: 584  MVKKIDLAPTVESDAAAIPEIKTSEA 661
              ++   +PT +      P+ K S++
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKS 1876


>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
            protein 89, isoform b protein.
          Length = 8081

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
 Frame = +2

Query: 401  KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 577
            K S  PD + KS +   E+PA+  + +  EV++      KE+ P++   +  + +A  + 
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428

Query: 578  -PNMVKKIDLAPTVESDAAAIPEIKTSEAAR 667
             P   +K   +PT +  + + P  KT +  +
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVK 1459



 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +2

Query: 416  PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 583
            P  + KS +   E+PA+  +  KT  ++   E+     KE+ PS+   +   +S    P 
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850

Query: 584  MVKKIDLAPTVESDAAAIPEIKTSEA 661
              ++   +PT +      P+ K S++
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKS 1876


>AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical
           protein F54A3.6 protein.
          Length = 470

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +2

Query: 449 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 595
           VEEP   P   KT +    A  +    PSA  + GS+   +   N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283


>U23523-10|AAP68941.1|  428|Caenorhabditis elegans Troponin t
           protein 2, isoform a protein.
          Length = 428

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +2

Query: 398 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 559
           A+  E  +A A+ A  + EEP A  E++  E +       +EEKP A   E  A
Sbjct: 21  AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
           protein F35A5.1 protein.
          Length = 1274

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 23/89 (25%), Positives = 34/89 (38%)
 Frame = +2

Query: 398 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 577
           AK    P  E+       + PA +P D   +  A  A   K    +  +  G ADS    
Sbjct: 549 AKKDPAPAKESLKPKADTKAPA-KPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKE 607

Query: 578 PNMVKKIDLAPTVESDAAAIPEIKTSEAA 664
           P   K  D +P     A  +P+ + + AA
Sbjct: 608 PEKSKPRDPSPKKAVPAKPVPKTEVAPAA 636


>Z83239-9|CAB05811.1|  517|Caenorhabditis elegans Hypothetical
           protein K08F9.4 protein.
          Length = 517

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 467 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 610
           + E+ + E+Q   A+ S+ E PS++    S+DS +      KK  +AP
Sbjct: 24  EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71


>Z81099-4|CAB03189.1|  517|Caenorhabditis elegans Hypothetical
           protein K08F9.4 protein.
          Length = 517

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 467 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 610
           + E+ + E+Q   A+ S+ E PS++    S+DS +      KK  +AP
Sbjct: 24  EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
 Frame = +2

Query: 401  KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 556
            K SEIPD +     +KV        E+P + PE+S+ E       ++K++K      + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925

Query: 557  ADSAAIIPNMVKK 595
             D + II    KK
Sbjct: 2926 NDGSEIIKMSKKK 2938


>U00025-4|AAN65312.1|  606|Caenorhabditis elegans Hypothetical
           protein PAR2.4b protein.
          Length = 606

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +2

Query: 131 VSLAMPVAEEKDVVPAQPIL 190
           V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336


>U00025-3|AAA50619.1|  804|Caenorhabditis elegans Hypothetical
           protein PAR2.4a protein.
          Length = 804

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +2

Query: 131 VSLAMPVAEEKDVVPAQPIL 190
           V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534


>AB110824-1|BAD80739.1|  606|Caenorhabditis elegans chondroitin
           polymerizing factor-S protein.
          Length = 606

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +2

Query: 131 VSLAMPVAEEKDVVPAQPIL 190
           V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336


>AB110823-1|BAD80738.1|  804|Caenorhabditis elegans chondroitin
           polymerizing factor protein.
          Length = 804

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +2

Query: 131 VSLAMPVAEEKDVVPAQPIL 190
           V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534


>U61953-3|AAC48071.3|  491|Caenorhabditis elegans Hypothetical
           protein R08C7.5 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
 Frame = +2

Query: 410 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 589
           E P A+  +  +K+   +  P+  KT     VA+  KE+KP     + +A  A  I  +V
Sbjct: 314 EKPTAKTAAPPVKLLTSSPPPKIPKT-----VAQPPKEKKPVMESVKTAAPPAKEIKPIV 368

Query: 590 KKIDLAPTVESDAAAIP-EIKTSEAA 664
            KI    T ++   A+P E+K ++AA
Sbjct: 369 AKI----TEKAAEPAVPKEVKPAKAA 390


>U28734-1|AAB52603.2|  397|Caenorhabditis elegans Hypothetical
           protein C53C9.2 protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 410 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 550
           E  + E +  + K+EEPAA+ E+ + E +    E   EE+    + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393


>AC006607-9|AAF60368.2|  995|Caenorhabditis elegans Hypothetical
           protein C09E7.7 protein.
          Length = 995

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 417 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 518
           P L  N+LI  WK +    K ++ KY +  LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232


>Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical
           protein T14B1.1 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 413 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVA-EISKEEKPSATDAEGSADSAAIIPNMV 589
           +PD E    D +VEEP A+    K  V A  A E  + E     +A+ S++   + P+  
Sbjct: 1   MPDPEDPGRDEEVEEPLAK----KIRVVAQEAGEDEESEMEKEPNADLSSEEELVAPDAE 56

Query: 590 KKIDLAPTVESDAAA 634
              D  P ++++A A
Sbjct: 57  ---DFVPEIDNEATA 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,643,701
Number of Sequences: 27780
Number of extensions: 187726
Number of successful extensions: 797
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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