Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2240
(716 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC043437-1|AAH43437.1| 618|Homo sapiens DCP1 decapping enzyme h... 31 3.1
BC015368-1|AAH15368.2| 488|Homo sapiens DCP1B protein protein. 31 3.1
AY146652-1|AAN62764.1| 618|Homo sapiens decapping enzyme hDcp1b... 31 3.1
AK056200-1|BAB71118.1| 618|Homo sapiens protein ( Homo sapiens ... 31 3.1
AB028953-1|BAA82982.1| 763|Homo sapiens KIAA1030 protein protein. 31 3.1
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 4.1
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 4.1
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 4.1
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 4.1
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 4.1
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 31 5.4
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 31 5.4
CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein. 30 7.2
AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open read... 30 7.2
AK058102-1|BAB71667.1| 410|Homo sapiens protein ( Homo sapiens ... 30 9.5
>BC043437-1|AAH43437.1| 618|Homo sapiens DCP1 decapping enzyme
homolog B (S. cerevisiae) protein.
Length = 618
Score = 31.5 bits (68), Expect = 3.1
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 249 VSSSQK*ETTFRCRVLWHRCSVTTSRGRRC--ST*ASAPSRRICRPRGLVVVAPTTASPA 422
+ +S+ + R + L+ + T +C ST A A S + R R APT+ +P
Sbjct: 341 IGTSRGVQNASRTQNLFEKLQSTPGAANKCDPSTPAPASSAALNRSR-----APTSVTPV 395
Query: 423 SRGGG*WERWLPHLNGSLPP 482
+ G G + + NGSLPP
Sbjct: 396 APGKGLAQPPQAYFNGSLPP 415
>BC015368-1|AAH15368.2| 488|Homo sapiens DCP1B protein protein.
Length = 488
Score = 31.5 bits (68), Expect = 3.1
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 249 VSSSQK*ETTFRCRVLWHRCSVTTSRGRRC--ST*ASAPSRRICRPRGLVVVAPTTASPA 422
+ +S+ + R + L+ + T +C ST A A S + R R APT+ +P
Sbjct: 211 IGTSRGVQNASRTQNLFEKLQSTPGAANKCDPSTPAPASSAALNRSR-----APTSVTPV 265
Query: 423 SRGGG*WERWLPHLNGSLPP 482
+ G G + + NGSLPP
Sbjct: 266 APGKGLAQPPQAYFNGSLPP 285
>AY146652-1|AAN62764.1| 618|Homo sapiens decapping enzyme hDcp1b
protein.
Length = 618
Score = 31.5 bits (68), Expect = 3.1
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 249 VSSSQK*ETTFRCRVLWHRCSVTTSRGRRC--ST*ASAPSRRICRPRGLVVVAPTTASPA 422
+ +S+ + R + L+ + T +C ST A A S + R R APT+ +P
Sbjct: 341 IGTSRGVQNASRTQNLFEKLQSTPGAANKCDPSTPAPASSAALNRSR-----APTSVTPV 395
Query: 423 SRGGG*WERWLPHLNGSLPP 482
+ G G + + NGSLPP
Sbjct: 396 APGKGLAQPPQAYFNGSLPP 415
>AK056200-1|BAB71118.1| 618|Homo sapiens protein ( Homo sapiens
cDNA FLJ31638 fis, clone NT2RI2003556. ).
Length = 618
Score = 31.5 bits (68), Expect = 3.1
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 249 VSSSQK*ETTFRCRVLWHRCSVTTSRGRRC--ST*ASAPSRRICRPRGLVVVAPTTASPA 422
+ +S+ + R + L+ + T +C ST A A S + R R APT+ +P
Sbjct: 341 IGTSRGVQNASRTQNLFEKLQSTPGAANKCDPSTPAPASSAALNRSR-----APTSVTPV 395
Query: 423 SRGGG*WERWLPHLNGSLPP 482
+ G G + + NGSLPP
Sbjct: 396 APGKGLAQPPQAYFNGSLPP 415
>AB028953-1|BAA82982.1| 763|Homo sapiens KIAA1030 protein protein.
Length = 763
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -3
Query: 471 NRLSAEAISPITLPLGTPDWRSSA-PRPPVLSVGKFCEMVHLLKSSIAFHDSSSPSIDAT 295
+RLS SP++ G+P+ + A PRP +L + E+ ++++F S+PS +
Sbjct: 613 SRLSPLTQSPLSSRTGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSP 672
Query: 294 TLGNEKSFPIF 262
+ + P +
Sbjct: 673 SQSSRSGSPSY 683
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 383 SRSANS-ARWCTCLSRASPSTTRRHRASMPQHSATKSR 273
SRS S A W SRASP+T RR R+ P S +SR
Sbjct: 1852 SRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSR 1889
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 383 SRSANS-ARWCTCLSRASPSTTRRHRASMPQHSATKSR 273
SRS S A W SRASP+T RR R+ P S +SR
Sbjct: 884 SRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSR 921
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 383 SRSANS-ARWCTCLSRASPSTTRRHRASMPQHSATKSR 273
SRS S A W SRASP+T RR R+ P S +SR
Sbjct: 1852 SRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSR 1889
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 383 SRSANS-ARWCTCLSRASPSTTRRHRASMPQHSATKSR 273
SRS S A W SRASP+T RR R+ P S +SR
Sbjct: 375 SRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSR 412
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 383 SRSANS-ARWCTCLSRASPSTTRRHRASMPQHSATKSR 273
SRS S A W SRASP+T RR R+ P S +SR
Sbjct: 1900 SRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSR 1937
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 30.7 bits (66), Expect = 5.4
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = -2
Query: 523 HPNLACDRTHEKAKGGS---EPFKCGSHLSHHPPPRDAGLAVVGATTTSPLG 377
+P CD +GG EP CG H + P G VG+TT G
Sbjct: 2406 YPGPGCDSLCRCREGGEVSCEPSSCGPHETCRPSGGSLGCVAVGSTTCQASG 2457
Score = 30.7 bits (66), Expect = 5.4
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = -2
Query: 523 HPNLACDRTHEKAKGGS---EPFKCGSHLSHHPPPRDAGLAVVGATTTSPLG 377
+P CD +GG EP CG H + P G VG+TT G
Sbjct: 3607 YPGPGCDSLCRCREGGEVSCEPSSCGPHETCRPSGGSLGCVAVGSTTCQASG 3658
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 30.7 bits (66), Expect = 5.4
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = -2
Query: 523 HPNLACDRTHEKAKGGS---EPFKCGSHLSHHPPPRDAGLAVVGATTTSPLG 377
+P CD +GG EP CG H + P G VG+TT G
Sbjct: 2406 YPGPGCDSLCRCREGGEVSCEPSSCGPHETCRPSGGSLGCVAVGSTTCQASG 2457
>CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein.
Length = 2151
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 541 LSLNNQHPNLACDRTHEKAKGGSEPFKCG 455
L L H C+ T+E GSEP +CG
Sbjct: 65 LELQRTHVESCCEETYETLDHGSEPGRCG 93
>AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open reading
frame 30 protein.
Length = 2151
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 541 LSLNNQHPNLACDRTHEKAKGGSEPFKCG 455
L L H C+ T+E GSEP +CG
Sbjct: 65 LELQRTHVESCCEETYETLDHGSEPGRCG 93
>AK058102-1|BAB71667.1| 410|Homo sapiens protein ( Homo sapiens
cDNA FLJ25373 fis, clone TST01951. ).
Length = 410
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 284 LPSVVASMLGDDESWKAMLDLSKCTISQNLP-TERTGGRGADDRQSGVPRGRV 439
+ +VA M G ++ W+ MLD + LP R G R+S PR V
Sbjct: 329 MQELVAKMSGQEQDWQKMLDRLLTEMDARLPGILRKDSSGTSKRKSQQPRPHV 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,702,148
Number of Sequences: 237096
Number of extensions: 2217292
Number of successful extensions: 7945
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7945
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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