Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2235
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    45   4e-05
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    45   4e-05
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    45   4e-05
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    45   4e-05
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec...    37   0.011
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l...    37   0.011
U82935-1|AAB40868.1|  680|Caenorhabditis elegans protein kinase ...    29   2.3  
U29376-3|AAM51503.1|  680|Caenorhabditis elegans Protein kinase ...    29   2.3  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AC006617-9|AAF39767.1|  409|Caenorhabditis elegans Hypothetical ...    28   5.3  
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li...    28   6.9  
AF016427-5|AAB65357.2|  273|Caenorhabditis elegans Ground-like (...    28   6.9  

>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +3

Query: 15  NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
           + +++VMAY FTI NSLQGL IF+FH +  +K R +
Sbjct: 765 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 800


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +3

Query: 15  NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
           + +++VMAY FTI NSLQGL IF+FH +  +K R +
Sbjct: 767 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 802


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +3

Query: 15  NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
           + +++VMAY FTI NSLQGL IF+FH +  +K R +
Sbjct: 765 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 800


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +3

Query: 15  NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
           + +++VMAY FTI NSLQGL IF+FH +  +K R +
Sbjct: 767 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 802


>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
            protein 2 protein.
          Length = 1338

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = +3

Query: 36   AYAFTILNSLQGLVIFIFHCLQNDKFRNECARLSRRHRWLSCCL 167
            A+ FTILN  QG+ IF+ H + N+K R   A + R  R   CCL
Sbjct: 1115 AWIFTILNCTQGIFIFVLHVVLNEKVR---ASIVRWLRTGICCL 1155


>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
            protein LAT-2 protein.
          Length = 1338

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = +3

Query: 36   AYAFTILNSLQGLVIFIFHCLQNDKFRNECARLSRRHRWLSCCL 167
            A+ FTILN  QG+ IF+ H + N+K R   A + R  R   CCL
Sbjct: 1115 AWIFTILNCTQGIFIFVLHVVLNEKVR---ASIVRWLRTGICCL 1155


>U82935-1|AAB40868.1|  680|Caenorhabditis elegans protein kinase C2
           A isoform protein.
          Length = 680

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 576 IRSRQSSPPFCSKSKMANATSDFDNRSVFPSP 481
           I +RQ  PPF  K K A+ TS+FD+      P
Sbjct: 617 IETRQIQPPFKPKLKSADDTSNFDSEFTHEVP 648


>U29376-3|AAM51503.1|  680|Caenorhabditis elegans Protein kinase c
           protein 2, isoforma protein.
          Length = 680

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 576 IRSRQSSPPFCSKSKMANATSDFDNRSVFPSP 481
           I +RQ  PPF  K K A+ TS+FD+      P
Sbjct: 617 IETRQIQPPFKPKLKSADDTSNFDSEFTHEVP 648


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
           protein T01D3.7 protein.
          Length = 2882

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -1

Query: 472 CIDAMLCECDALW-GMFCGVGTRIDLASSFG 383
           CI    CECDA W G  C V + ID   + G
Sbjct: 837 CIQPNSCECDAGWMGETCSVTSCIDSQCTHG 867


>AC006617-9|AAF39767.1|  409|Caenorhabditis elegans Hypothetical
           protein C39B5.2 protein.
          Length = 409

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = -3

Query: 635 VGV*KKVFFPYTGTGIA----ARPFVRANRARHFVRKARWRTRPQILIIVRYF 489
           VGV   V   Y GT I     ARP+  A R R+++   +   +PQI   V++F
Sbjct: 320 VGVEGFVSMRYAGTTILEELKARPWNGARRPRNYIFSNKTHGKPQIFDCVKWF 372


>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical protein
            F31D5.5 protein.
          Length = 1788

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +3

Query: 39   YAFTILNSLQGLVIFIFHCLQNDKFRNECAR-LSRRHRW 152
            Y F +L   QG+ +F+    +  + RNE  +  SR  +W
Sbjct: 1737 YIFVLLLGTQGIDLFLIFLYRRQRLRNESRKWSSREEKW 1775


>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
            protein MTH-1 protein.
          Length = 1757

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +3

Query: 39   YAFTILNSLQGLVIFIFHCLQNDKFRNECAR-LSRRHRW 152
            Y F +L   QG+ +F+    +  + RNE  +  SR  +W
Sbjct: 1706 YIFVLLLGTQGIDLFLIFLYRRQRLRNESRKWSSREEKW 1744


>AF016427-5|AAB65357.2|  273|Caenorhabditis elegans Ground-like (grd
           related) protein13 protein.
          Length = 273

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 582 PPIRSRQSSPPFCSKSKMANATSDFDNRSV 493
           P   S  ++PPF S S  +NA + F N  +
Sbjct: 105 PVFTSSYNAPPFASSSSYSNAPNSFQNAPI 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,088,393
Number of Sequences: 27780
Number of extensions: 379294
Number of successful extensions: 1074
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)