Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2234
         (675 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096769-1|BAC04859.1|  268|Homo sapiens .  protein.                   30   8.6  
AK092334-1|BAC03865.1|  268|Homo sapiens protein ( Homo sapiens ...    30   8.6  

>AK096769-1|BAC04859.1|  268|Homo sapiens .  protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +3

Query: 294 DNHPMLPRHLCIHRCTTTNLQQCTFKQAALITLRIERHARKDXHVCLCM*IITF*NLCTG 473
           D H  L  H+C+HR   T++Q     Q  +       +   D H  LC  +    +LCT 
Sbjct: 41  DAHTGLCTHVCMHRHLCTHMQM--HPQYPICATHRHTYMETDAHTGLCTHVHMHRHLCTH 98

Query: 474 LE 479
           ++
Sbjct: 99  MQ 100


>AK092334-1|BAC03865.1|  268|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35015 fis, clone OCBBF2014229. ).
          Length = 268

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +3

Query: 294 DNHPMLPRHLCIHRCTTTNLQQCTFKQAALITLRIERHARKDXHVCLCM*IITF*NLCTG 473
           D H  L  H+C+HR   T++Q     Q  +       +   D H  LC  +    +LCT 
Sbjct: 41  DAHTGLCTHVCMHRHLCTHMQM--HPQYPICATHRHTYMETDAHTGLCTHVHMHRHLCTH 98

Query: 474 LE 479
           ++
Sbjct: 99  MQ 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,051,987
Number of Sequences: 237096
Number of extensions: 1210546
Number of successful extensions: 2075
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2075
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)