Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2228
(729 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 93 5e-20
SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr 2... 30 0.39
SPCP1E11.07c |cwf18||complexed with Cdc5 protein Cwf18 |Schizosa... 28 1.2
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 2.1
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 25 8.4
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 25 8.4
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 92.7 bits (220), Expect = 5e-20
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Frame = -2
Query: 566 VNAVCKVFSLDPTLDEEMTLVRRNLLRLIGVGEFSSAAEWREPCAACVLTELTCRVCN-- 393
V ++C VF L L+ E+ ++++LL L+ + EFS+ A +R P L ++ C+ C
Sbjct: 2016 VKSICAVFELSHDLNLEVRFLKKSLLSLLQIQEFSTQAVFRYPSRRLSLDQIPCKQCGVH 2075
Query: 392 -------HXXXXXXXXXXXXDTERPACLCPTCGTAYDNQEIEWRLIETMNKRTMAYTLQD 234
H C +C YD E L++ + + Y LQD
Sbjct: 2076 QDFDLCLHEHLWPTRDDMGTLVFSDGWSCSSCNLVYDRWVFEETLVDNLYHQLTLYQLQD 2135
Query: 233 LICSRCHQVKRENLSVVCDCAGDFSLMVPVTEIKDQLMTFKTIAEYYQMPLLLEQI 66
LICS+C VK+ +L C C+G++ L + T+ ++ L ++++A++Y+ +L +
Sbjct: 2136 LICSKCKTVKQWSLKERCSCSGEWVLQLSPTKFREMLNVYQSVADFYEFSILQNSV 2191
>SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 683
Score = 29.9 bits (64), Expect = 0.39
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -2
Query: 650 PVTTL*NDGPVNCNTTHYRANWVPGPPFVNAVCKVFSLDPT 528
PV L + GP T + W P F NA VF+LDPT
Sbjct: 446 PVAVLIHGGPQGSWTDSWSTRWNPAV-FANAGFIVFALDPT 485
>SPCP1E11.07c |cwf18||complexed with Cdc5 protein Cwf18
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 142
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 326 PTCGTAYDNQEIEWRLIETMNKRTMAYTLQDLICSRCHQVKR 201
PT D +E R +ET N+ +A+ +Q LI R H ++
Sbjct: 101 PTWDLERDLKE-RMRSLETQNQNAIAFYIQQLISERAHSTEK 141
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.5 bits (58), Expect = 2.1
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 986 SSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTPIT 1033
Score = 27.1 bits (57), Expect = 2.7
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 1550 SSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPIT 1597
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 470 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 517
Score = 26.6 bits (56), Expect = 3.6
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGTQFAL 597
S+++LNS TPI S + TS I+SS V S T T + P T++++
Sbjct: 542 SSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITRYSV 593
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S TS I+SS V S T TAL P T
Sbjct: 650 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPIT 697
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S TS I+SS V S T TAL P T
Sbjct: 674 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTPIT 721
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 878 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 925
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 1034 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 1081
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S TS I+SS V S T TAL P T
Sbjct: 1766 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPIT 1813
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 1814 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 1861
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 2006 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 2053
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 2582 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 2629
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 2678 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 2725
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 2906 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 2953
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 3002 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 3049
Score = 26.2 bits (55), Expect = 4.8
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T TAL P T
Sbjct: 2534 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSLTALNSSTPIT 2581
Score = 25.8 bits (54), Expect = 6.3
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + +S I+SS V S T TAL P T
Sbjct: 410 SSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPIT 457
Score = 25.8 bits (54), Expect = 6.3
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T T L P T
Sbjct: 770 SSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVLNSSTPIT 817
Score = 25.8 bits (54), Expect = 6.3
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGTQFAL**VVLQFT 621
S+++LNS TPI S + +S I+SS V S T TAL P T ++ T
Sbjct: 1934 SSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1993
Query: 622 GPSFYNVVT 648
S N T
Sbjct: 1994 SSSVLNTST 2002
Score = 25.4 bits (53), Expect = 8.4
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S TS I+SS V S T T L P T
Sbjct: 1598 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPIT 1645
Score = 25.4 bits (53), Expect = 8.4
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S TS I+SS V S T T L P T
Sbjct: 1862 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPIT 1909
Score = 25.4 bits (53), Expect = 8.4
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S TS I+SS V S T T L P T
Sbjct: 2054 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPIT 2101
Score = 25.4 bits (53), Expect = 8.4
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + +S I+SS V S T TAL P T
Sbjct: 2126 SSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPIT 2173
Score = 25.4 bits (53), Expect = 8.4
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + +S I+SS V S T TAL P T
Sbjct: 2438 SSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPIT 2485
Score = 25.4 bits (53), Expect = 8.4
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T T L P T
Sbjct: 2486 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPIT 2533
Score = 25.4 bits (53), Expect = 8.4
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TPI S + TS I+SS V S T T L P T
Sbjct: 2786 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPIT 2833
Score = 25.4 bits (53), Expect = 8.4
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTSV-ISSSKV--GSRENTLQTALTKGGPGT 585
S+++LNS TP+ S + +S I+SS V S T TAL P T
Sbjct: 3350 SSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPIT 3397
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 155 MVPVTEIKDQLMTFKTIAEYYQMPLLL 75
++P I Q+ F + A+YYQ P L
Sbjct: 158 LIPSGPILSQIREFLSTADYYQRPFFL 184
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 204 FYLVTSATYKILQRIRHRTFVHRLD 278
F + T KILQR+RH+ V L+
Sbjct: 317 FPITTVREVKILQRLRHKNIVRLLE 341
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,666,718
Number of Sequences: 5004
Number of extensions: 51220
Number of successful extensions: 266
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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