BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2224
(462 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX005143-5|CAM25861.1| 525|Homo sapiens complement component 2 ... 30 4.5
BX005143-3|CAM25859.1| 353|Homo sapiens complement component 2 ... 30 4.5
AL662849-5|CAI17449.2| 525|Homo sapiens complement component 2 ... 30 4.5
AL662849-3|CAM24859.1| 353|Homo sapiens complement component 2 ... 30 4.5
AL645922-6|CAI41720.2| 525|Homo sapiens complement component 2 ... 30 4.5
AL645922-4|CAM25395.1| 353|Homo sapiens complement component 2 ... 30 4.5
BC043207-1|AAH43207.2| 559|Homo sapiens ADAM7 protein protein. 29 5.9
AF215824-1|AAG43987.1| 754|Homo sapiens a disintegrin and metal... 29 5.9
AF090327-1|AAC36742.1| 588|Homo sapiens sperm maturation-relate... 29 5.9
>BX005143-5|CAM25861.1| 525|Homo sapiens complement component 2
protein.
Length = 525
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = +3
Query: 261 IFCMCEVYPGGVC-NPSF---CVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIWG 428
+FC+ +YP G C NP V +R +G V L ++ C +W
Sbjct: 3 LFCLLFLYPAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWS 62
Query: 429 G--PVPNSPYS 455
G P+ PYS
Sbjct: 63 GTEPICRQPYS 73
>BX005143-3|CAM25859.1| 353|Homo sapiens complement component 2
protein.
Length = 353
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = +3
Query: 261 IFCMCEVYPGGVC-NPSF---CVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIWG 428
+FC+ +YP G C NP V +R +G V L ++ C +W
Sbjct: 7 LFCLLFLYPAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWS 66
Query: 429 G--PVPNSPYS 455
G P+ PYS
Sbjct: 67 GTEPICRQPYS 77
>AL662849-5|CAI17449.2| 525|Homo sapiens complement component 2
protein.
Length = 525
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = +3
Query: 261 IFCMCEVYPGGVC-NPSF---CVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIWG 428
+FC+ +YP G C NP V +R +G V L ++ C +W
Sbjct: 3 LFCLLFLYPAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWS 62
Query: 429 G--PVPNSPYS 455
G P+ PYS
Sbjct: 63 GTEPICRQPYS 73
>AL662849-3|CAM24859.1| 353|Homo sapiens complement component 2
protein.
Length = 353
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = +3
Query: 261 IFCMCEVYPGGVC-NPSF---CVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIWG 428
+FC+ +YP G C NP V +R +G V L ++ C +W
Sbjct: 7 LFCLLFLYPAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWS 66
Query: 429 G--PVPNSPYS 455
G P+ PYS
Sbjct: 67 GTEPICRQPYS 77
>AL645922-6|CAI41720.2| 525|Homo sapiens complement component 2
protein.
Length = 525
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = +3
Query: 261 IFCMCEVYPGGVC-NPSF---CVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIWG 428
+FC+ +YP G C NP V +R +G V L ++ C +W
Sbjct: 3 LFCLLFLYPAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWS 62
Query: 429 G--PVPNSPYS 455
G P+ PYS
Sbjct: 63 GTEPICRQPYS 73
>AL645922-4|CAM25395.1| 353|Homo sapiens complement component 2
protein.
Length = 353
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = +3
Query: 261 IFCMCEVYPGGVC-NPSF---CVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIWG 428
+FC+ +YP G C NP V +R +G V L ++ C +W
Sbjct: 7 LFCLLFLYPAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWS 66
Query: 429 G--PVPNSPYS 455
G P+ PYS
Sbjct: 67 GTEPICRQPYS 77
>BC043207-1|AAH43207.2| 559|Homo sapiens ADAM7 protein protein.
Length = 559
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +3
Query: 246 MNGSWIFCMCE--VYPGGVCNPSFCVCV*YRLKNGAG-VSNHMWHRLKNDDG---DDKPC 407
++G W++ + YPGG+C P + + L ++N M H+L ++ G D+ PC
Sbjct: 106 LSGKWLYSHVQGISYPGGMCLPYYSTSIIKDLLPDTNIIANRMAHQLGHNLGMQHDEFPC 165
>AF215824-1|AAG43987.1| 754|Homo sapiens a disintegrin and
metalloproteinase 7 protein.
Length = 754
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +3
Query: 246 MNGSWIFCMCE--VYPGGVCNPSFCVCV*YRLKNGAG-VSNHMWHRLKNDDG---DDKPC 407
++G W++ + YPGG+C P + + L ++N M H+L ++ G D+ PC
Sbjct: 291 LSGKWLYSHVQGISYPGGMCLPYYSTSIIKDLLPDTNIIANRMAHQLGHNLGMQHDEFPC 350
>AF090327-1|AAC36742.1| 588|Homo sapiens sperm maturation-related
glycoprotein GP-83 protein.
Length = 588
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +3
Query: 246 MNGSWIFCMCE--VYPGGVCNPSFCVCV*YRLKNGAG-VSNHMWHRLKNDDG---DDKPC 407
++G W++ + YPGG+C P + + L ++N M H+L ++ G D+ PC
Sbjct: 125 LSGKWLYSHVQGISYPGGMCLPYYSTSIIKDLLPDTNIIANRMAHQLGHNLGMQHDEFPC 184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,736,712
Number of Sequences: 237096
Number of extensions: 1310219
Number of successful extensions: 3973
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3973
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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