Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2223
(651 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 44 1e-06
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 36 4e-04
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 35 6e-04
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 34 0.001
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 27 0.16
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 23 3.4
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 4.5
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 5.9
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 44.0 bits (99), Expect = 1e-06
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 234 HLECEVKANPPAYKFIWYFNDSEIKSNS-VWGENVTSQV--LYVEEVTREHAGRYSCVAV 404
+L+C V W + E+ +S V + V +V L + +T HAG Y C A
Sbjct: 602 NLQCIVPTGDLPLNIRWSYPGEEMGGSSGVLAKKVADRVSMLMISVITARHAGEYVCTAE 661
Query: 405 NSIGETRAESFTVTVLYPP-GMLPPRDK 485
N+ G T + S T+TV PP +L P DK
Sbjct: 662 NAAG-TASHSTTLTVNVPPRWILEPTDK 688
Score = 37.1 bits (82), Expect = 1e-04
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Frame = +3
Query: 12 WVSSSSTAISYLELHPSVGDDGATLACVATNHVMAPSRNSKADVITLNVTYSPLLEVVRV 191
+V+ + +S+L + + +DG C+A + V + +++ LNV Y L +R
Sbjct: 445 YVTVNGDVVSHLNISSTHTNDGGLYKCIAASKVGSAEHSAR-----LNV-YG--LPFIRH 496
Query: 192 GDGKLNEVVELDPLHLECEVKANPPAYKFIWYFNDSEIKSNSVWGENVTSQVLYVEEVTR 371
D K +V + L + C V A P +W D+ + + + + L +E V R
Sbjct: 497 MDKK--AIVAGETLRVTCPV-AGYPIESIVWE-RDTRVLPINRKQKVFPNGTLIIENVER 552
Query: 372 -EHAGRYSCVAVNSIGETRAESFTVTVLYPP 461
Y+CVA N+ G + + V V+ PP
Sbjct: 553 MSDQATYTCVARNAQGYSARGTLEVQVMVPP 583
Score = 31.9 bits (69), Expect = 0.006
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +3
Query: 231 LHLECEVKANP-PAYKFIWYFNDSEIKSNSVWGENV--TSQVLYVEEVTREHAGRYSCVA 401
L L C + P P +++ + S + E V S L + E E +G+Y C+
Sbjct: 230 LPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLCIV 289
Query: 402 VNSIGETRAESFTVTVLYPPG 464
NS+G E+ +TV P G
Sbjct: 290 NNSVGGESVET-VLTVTAPLG 309
Score = 29.5 bits (63), Expect = 0.029
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 264 PAYKFIWYFNDSEIKSNSVWGENVTSQVLYVEEVTREHAGRYSCVAVNSIG 416
PA + W + ++S+ + + L+++EV R AG YSC N+ G
Sbjct: 1304 PAPEVTWKVRGAVLQSSDRLRQ-LPEGSLFIKEVDRTDAGEYSCYVENTFG 1353
Score = 27.9 bits (59), Expect = 0.090
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 330 NVTSQVLYVEEVTREHAGRYSCVAVNSIGETRAESFTVTVLYPP 461
+V L + + + + G Y C AVN IG + ++V PP
Sbjct: 734 SVEDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPP 777
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 35.5 bits (78), Expect = 4e-04
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +3
Query: 126 NSKADVITLNVTYSPLLEVVRVGDGKLNEVVEL-----DPLHLECEVKANPPAYKFIWYF 290
+ K +V + +S L V V K EV + D + ++C+V PP +W
Sbjct: 288 DGKLNVNEFYMAFSKLYSVSVVSLDKSLEVNHISARVGDNVEIKCDVTGTPPP-PLVWRR 346
Query: 291 NDSEIKS-NSVWGENVTSQVLYVEEVTREHAGRYSCVAVNSIGETRAESFTVTVLYPPGM 467
N +++++ N LY+ +V HAG Y+C AV + + T+ + P
Sbjct: 347 NGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHAVRNQDVVQTHVLTIHTI-PEVK 405
Query: 468 LPPR 479
+ PR
Sbjct: 406 VTPR 409
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 35.1 bits (77), Expect = 6e-04
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Frame = +3
Query: 12 WVSSSSTAISYLELHPSVGDDGATLACVATNHVMAPSRNSKADVITLNVTYSPLLEVVRV 191
+V+ IS++ + + +DG +C+A N + ++ LNV P + ++
Sbjct: 473 YVTVHGDVISHVNISHVMVEDGGEYSCMAENRAGKVTHAAR-----LNVYGLPYIRLIP- 526
Query: 192 GDGKLNEVVELDPLHLECEVKANPPAYKFIWYFNDSEIKSNSVWGENVTSQVLYVEEVTR 371
K+ V + L L+C V A P + W + E+ + + + + L + V +
Sbjct: 527 ---KVTAVAG-ETLRLKCPV-AGYPIEEIKWERANRELPDD-LRQKVLPDGTLVITSVQK 580
Query: 372 E-HAGRYSCVAVNSIGETRAESFTVTVLYPPGMLP 473
+ AG Y+C A N G + S V V+ PP + P
Sbjct: 581 KGDAGVYTCSARNKQGHSARRSGDVAVIVPPKISP 615
Score = 33.9 bits (74), Expect = 0.001
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 243 CEVKANPPAYK-FIWYFNDSEIKSNSVWGENVTSQVLYVEEVTREHAGRYSCVAVNSIGE 419
CEV +P A FI ++ D + G S++L + + RE G Y C+ S G+
Sbjct: 352 CEVSTHPQAGPHFITWYKDGR----QLPGTGRQSELLRLNGINREDRGMYQCIVRRSEGD 407
Query: 420 TRAESFTVTVLYPPGML 470
T S + + P ML
Sbjct: 408 TAQASAELQLGNAPPML 424
Score = 31.9 bits (69), Expect = 0.006
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 339 SQVLYVEEVTREHAGRYSCVAVNSIGETRAESFTVTVLYPPGMLPPRD 482
+ +L +E ++ +H G YSCVA N E V + P ++ P D
Sbjct: 667 NSILMIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPPRWIVEPTD 714
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 375 HAGRYSCVAVNSIGETRAESFTV 443
H+ Y CVA NS+G + V
Sbjct: 102 HSAAYRCVASNSVGRVLSRDVQV 124
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 33.9 bits (74), Expect = 0.001
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 243 CEVKANPPAYK-FIWYFNDSEIKSNSVWGENVTSQVLYVEEVTREHAGRYSCVAVNSIGE 419
CEV +P A FI ++ D + G S++L + + RE G Y C+ S G+
Sbjct: 352 CEVSTHPQAGPHFITWYKDGR----QLPGTGRQSELLRLNGINREDRGMYQCIVRRSEGD 407
Query: 420 TRAESFTVTVLYPPGML 470
T S + + P ML
Sbjct: 408 TAQASAELQLGNAPPML 424
Score = 33.9 bits (74), Expect = 0.001
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Frame = +3
Query: 12 WVSSSSTAISYLELHPSVGDDGATLACVATNHVMAPSRNSKADVITLNVTYSPLLEVVRV 191
+V+ IS++ + + +DG +C+A N + ++ LNV P + ++
Sbjct: 473 YVTVHGDVISHVNISHVMVEDGGEYSCMAENRAGKVTHAAR-----LNVYGLPYIRLIP- 526
Query: 192 GDGKLNEVVELDPLHLECEVKANPPAYKFIWYFNDSEIKSNSVWGENVTSQVLYVEEVTR 371
K+ V + L L+C V A P + W + E+ + + + + L + V +
Sbjct: 527 ---KVTAVAG-ETLRLKCPV-AGYPIEEIKWERANRELPDD-LRQKVLPDGTLVITSVQK 580
Query: 372 E-HAGRYSCVAVNSIGETRAESFTVTVLYPPGMLP 473
+ AG Y+C A N G + S V V+ PP + P
Sbjct: 581 KGDAGVYTCSARNKQGHSARRSGDVAVIVPPIIEP 615
Score = 32.3 bits (70), Expect = 0.004
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 339 SQVLYVEEVTREHAGRYSCVAVNSIGETRAESFTVTVLYPPGMLPPRD 482
S +L + + EH+G Y+CVA N E R + + P ++ P D
Sbjct: 671 SSLLSITNLAAEHSGDYTCVAANPAAEVRYTAKLQVKVPPRWIVEPTD 718
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 375 HAGRYSCVAVNSIGETRAESFTV 443
H+ Y CVA NS+G + V
Sbjct: 102 HSAAYRCVASNSVGRVLSRDVQV 124
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 372 EHAGRYSCVAVNSIGETRAESFTVTVLYPPGML 470
E G YSC+ V+ I TR +F T ++ PG++
Sbjct: 282 EEQGNYSCLKVDLI-FTRDRAFYFTTVFIPGII 313
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 189 VGDGKLNEVVELDPLHLECEVK 254
V DGK+N E L++EC +K
Sbjct: 47 VNDGKINIEDENVQLYIECAMK 68
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 628 PVIWSRGRRREPGREALLQA 569
PVIWS E R ++QA
Sbjct: 473 PVIWSNDLATEHDRSVMIQA 492
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 356 NVQYLAGNILPPYAI 312
NV+YL G+ LPP I
Sbjct: 61 NVKYLPGHKLPPNII 75
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,851
Number of Sequences: 438
Number of extensions: 3855
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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