Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2219
         (514 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0765 - 21341872-21342198,21342482-21342635,21342716-213429...    27   8.8  
07_01_1023 + 8840754-8842988,8843189-8843362                           27   8.8  

>07_03_0765 -
           21341872-21342198,21342482-21342635,21342716-21342953,
           21343072-21343282,21343475-21343611,21347267-21348179
          Length = 659

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 290 YDVTFLLDFNKLYFPLKPTYNLGIRIS 210
           YD   ++ F+ L FP+ P YN G+ ++
Sbjct: 148 YDDPCIVRFSNLVFPVSPPYNKGMFVA 174


>07_01_1023 + 8840754-8842988,8843189-8843362
          Length = 802

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 359 NYPYNFGVPQSASIFTQTRTRAIRVLSVVQK 451
           NY   F +PQSA +  +T   A+ V++++ +
Sbjct: 648 NYTIPFSIPQSALVIMETEKDAVAVVNMLNE 678


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,167,479
Number of Sequences: 37544
Number of extensions: 224549
Number of successful extensions: 384
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)