Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2218
         (733 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    29   0.060
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    29   0.060
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    29   0.060
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           28   0.10 
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    26   0.32 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.73 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   1.3  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   5.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   5.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.8  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   9.0  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 0.060
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 310 FDFPGISDLPSDEGSNHGNIRDYYLKPGY-DNHREALKQDVDLDGKISSNEISGLLKQ 480
           FDFP +S   SDEGSN     +  L+P + D   + L+  +    K    +++G+L +
Sbjct: 54  FDFPSLSFEDSDEGSNWN--WNTLLRPNFLDGWYQTLQSAISAHMKKVREQMAGILSR 109


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 0.060
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 310 FDFPGISDLPSDEGSNHGNIRDYYLKPGY-DNHREALKQDVDLDGKISSNEISGLLKQ 480
           FDFP +S   SDEGSN     +  L+P + D   + L+  +    K    +++G+L +
Sbjct: 54  FDFPSLSFEDSDEGSNWN--WNTLLRPNFLDGWYQTLQSAISAHMKKVREQMAGILSR 109


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 0.060
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 310 FDFPGISDLPSDEGSNHGNIRDYYLKPGY-DNHREALKQDVDLDGKISSNEISGLLKQ 480
           FDFP +S   SDEGSN     +  L+P + D   + L+  +    K    +++G+L +
Sbjct: 54  FDFPSLSFEDSDEGSNWN--WNTLLRPNFLDGWYQTLQSAISAHMKKVREQMAGILSR 109


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 27.9 bits (59), Expect = 0.10
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
 Frame = +1

Query: 202 IDPMDLHRDFTKHMHEM--FRSFG---SMFGDVQSFFHDENFDFPGISDLPSDEGSNHGN 366
           + P+D+H D T   H M  FR F    S+ GD ++   + ++  P       D G + G+
Sbjct: 380 LSPVDIHDDRTLFFHPMSSFREFAVSTSILGDKKTAEENTDYFMPIGRPRAKDYGHSSGS 439

Query: 367 IRD 375
           + D
Sbjct: 440 VID 442


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +1

Query: 310 FDFPGISDLPSDEGSN 357
           FDFP +S   SDEGSN
Sbjct: 10  FDFPSLSFEDSDEGSN 25


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 358 HGNIRDYYLKPGYDNHREALKQDVDLDGK 444
           H  +  YYLKP YD    A K  V   G+
Sbjct: 403 HQEMALYYLKPSYDAQEPAWKTHVWKKGR 431


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 430 DLDGKISSNEISGLLKQKDNMQDANQKPLFNGNLVPGRSFCQTI 561
           DLD K  +N+IS L    D     N    +NG++   ++  Q I
Sbjct: 378 DLDTKKWNNKISALRALNDLYNVKNTLDSYNGSMEINQNIAQNI 421


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 374 SLMLPWLEPSSEGKSLI 324
           +LM  WLEPSS  + +I
Sbjct: 261 TLMTLWLEPSSTERMII 277


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 436 DGKISSNEISGLLKQKDNMQDANQKPLFNGNL 531
           DG++     + LL++ D+M   N    +N  L
Sbjct: 63  DGRVGGKRRNILLRRTDSMDSQNSASTYNSFL 94


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/44 (25%), Positives = 17/44 (38%)
 Frame = +1

Query: 202  IDPMDLHRDFTKHMHEMFRSFGSMFGDVQSFFHDENFDFPGISD 333
            ++P D   +      EM R  G      +S+  D     PG S+
Sbjct: 1161 VEPTDKQANSKTRRQEMMREAGRGIESAKSYVVDVRVHVPGESE 1204


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 127 ENRSGAALAEYRETNVIC 74
           EN  G  LAE+  T V+C
Sbjct: 50  ENLLGRVLAEFDGTTVLC 67


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 145 SDDEDDGDELYSRN 186
           S D DD DE Y+ N
Sbjct: 75  SSDHDDSDEEYAAN 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,373
Number of Sequences: 438
Number of extensions: 4767
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)