Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2217
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060858-1|AAL28406.1|  607|Drosophila melanogaster GM03282p pro...    34   0.15 
AE014134-533|AAF51166.1|  607|Drosophila melanogaster CG17265-PA...    34   0.15 

>AY060858-1|AAL28406.1|  607|Drosophila melanogaster GM03282p
           protein.
          Length = 607

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = -3

Query: 553 LRSVYRNVD*LERAGVAPVSIAIQPTDPSCSERPRPTRTSDATRYRSTFPARHS*QESGA 374
           +RS+ R +  LE     P +   QPT P+    P PT TS AT  +S        Q+   
Sbjct: 453 VRSLERRIQQLEEERTTPTAHLQQPTTPTPQATPTPTATSAATPAKSAASPHQQQQQQQQ 512

Query: 373 Q 371
           Q
Sbjct: 513 Q 513


>AE014134-533|AAF51166.1|  607|Drosophila melanogaster CG17265-PA
           protein.
          Length = 607

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = -3

Query: 553 LRSVYRNVD*LERAGVAPVSIAIQPTDPSCSERPRPTRTSDATRYRSTFPARHS*QESGA 374
           +RS+ R +  LE     P +   QPT P+    P PT TS AT  +S   + H  Q+   
Sbjct: 455 VRSLERRIQQLEEERTTPTAHLQQPTTPTPQATPTPTVTSAATPAKSA-ASPHQQQQQQQ 513

Query: 373 QYR 365
           Q++
Sbjct: 514 QHQ 516


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,725,605
Number of Sequences: 53049
Number of extensions: 462963
Number of successful extensions: 1189
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)