Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2214
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81577-3|CAB04649.1| 528|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z83233-8|CAB05759.2| 378|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 5.1
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 5.1
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 5.1
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 5.1
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.1
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.1
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 5.1
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.1
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 28 6.7
>Z81577-3|CAB04649.1| 528|Caenorhabditis elegans Hypothetical
protein R11.3 protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.72
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 638 NRFEFPAAVLQWAARSQKDLKLEPLPGVVGPRVQELQ--KCFRRSKGGQLFPLTSWRK 471
N FPA L WA RSQ + + P V P V + Q K +R+ KG L W +
Sbjct: 400 NTVNFPAMKLAWALRSQLESEQAP-AAVFDPMVVDKQQRKKYRKKKGTNLDYKMIWEE 456
>Z83233-8|CAB05759.2| 378|Caenorhabditis elegans Hypothetical
protein K06B4.8 protein.
Length = 378
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 136 KTPTSLDINPSGLLFAFVELNHYNNEC 216
KTP LD +L+ F+ELN N EC
Sbjct: 232 KTPALLDQTSCMVLYKFIELNITNEEC 258
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 491 EKVDLPSIFENISEVPERVDPQPPAAV 571
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 425 NDLLQQLDSQCKQENIFSNWLEEKVDLPS 511
N +Q++D+ C +NI + K+D+P+
Sbjct: 103 NHWMQEVDTYCTNDNIIKMMVANKIDMPN 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,275,778
Number of Sequences: 27780
Number of extensions: 346060
Number of successful extensions: 1169
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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