Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2212
(448 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 139 8e-34
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 139 1e-33
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 139 1e-33
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 43 1e-04
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 43 1e-04
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 30 0.97
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791... 29 2.3
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 28 3.0
11_01_0355 + 2679561-2680985,2681183-2682295 28 3.9
10_08_0406 - 17688069-17690643,17691065-17691132 28 3.9
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 28 3.9
11_08_0037 + 27859867-27860382,27860471-27861440,27861647-278619... 27 5.2
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907... 27 5.2
08_02_1369 - 26445725-26445812,26446443-26446529,26446720-264469... 27 5.2
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225 27 5.2
02_01_0152 - 1070249-1070296,1070443-1070515,1070601-1070671,107... 27 5.2
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 27 6.9
09_04_0351 + 16904075-16904738,16906285-16906366,16906533-169066... 27 6.9
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 27 6.9
12_02_0723 - 22532379-22532902,22533060-22533135,22533195-225333... 27 9.1
03_02_0600 - 9748382-9748933,9749805-9749840,9751164-9751218,975... 27 9.1
02_03_0134 - 15596379-15597689 27 9.1
01_06_0845 - 32389889-32389909,32390074-32390241,32390334-323904... 27 9.1
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 139 bits (337), Expect = 8e-34
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Frame = +2
Query: 62 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 241
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 242 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPL* 415
+ IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 416 VVIPAHNTGL 445
VV+P NTGL
Sbjct: 124 VVVPPGNTGL 133
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 139 bits (336), Expect = 1e-33
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Frame = +2
Query: 62 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 241
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 242 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPL* 415
+ IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 416 VVIPAHNTGL 445
VV+P NTGL
Sbjct: 124 VVVPPGNTGL 133
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 139 bits (336), Expect = 1e-33
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Frame = +2
Query: 62 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 241
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 242 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPL* 415
+ IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 416 VVIPAHNTGL 445
VV+P NTGL
Sbjct: 124 VVVPPGNTGL 133
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = +2
Query: 32 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS- 208
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 209 IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 385
I L GK M + D L KL ++G+ G FT +V E +
Sbjct: 203 IFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDF 262
Query: 386 ARPGAIA 406
AR G+IA
Sbjct: 263 ARTGSIA 269
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 42.7 bits (96), Expect = 1e-04
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = +2
Query: 20 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 199
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 200 GSS-IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENK 373
SS I L GK M + D L KL ++G+ G FT +V E +
Sbjct: 63 SSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFE 122
Query: 374 VQAPARPGAI 403
AR G+I
Sbjct: 123 EHDFARTGSI 132
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 29.9 bits (64), Expect = 0.97
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 188 ISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDK 358
I L + L+ + ++ L N AL+KL LPH ++GN+GF+ + + ++ D
Sbjct: 372 IGLLQKLVYLLLSANQLSGSVPRTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDL 431
Query: 359 LLENKVQAPARPGAIAPL 412
+L++ A P + L
Sbjct: 432 ILDHNSFVGALPDHLGNL 449
>03_05_0968 +
29277122-29277445,29278389-29278505,29278957-29279114,
29279678-29279727,29279968-29280161,29280867-29281049,
29281152-29281270,29281383-29281522,29281857-29281937,
29282286-29282389
Length = 489
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 328 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 233
G HEA+ L W+ + GW + F GFA H
Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 28.3 bits (60), Expect = 3.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +2
Query: 272 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPL*VVIPA 430
PAL+K L H K VG + T GDL + + L+++KV P PGA+ + + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 261 WTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKL 383
W ++ HTS TL+ SP+ +S+ T+C+ + +
Sbjct: 480 WNPMRNGSAPHHTSELTLSFSSPSPSSISGYTSCYNNNNMM 520
>10_08_0406 - 17688069-17690643,17691065-17691132
Length = 880
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 103 DHPTLGRVPKMFHRGCR*RGLATDAA-DPYLATWLQYRAHGKKHNDAQSHQR 255
D P R ++FHR R RG A D A D W+ + ND Q H +
Sbjct: 789 DDPAARRGARLFHR-LRRRGPAFDKAWDELARFWVHLVVYLAPSNDVQGHAK 839
>07_03_0196 +
14995224-14995489,14995859-14995877,14996703-14996839,
14998365-14998457,15001597-15001932,15003035-15003503
Length = 439
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -1
Query: 400 GTRTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGW 272
G +WS F +LN +S H+ V L+ W + W
Sbjct: 197 GNAENWSSQGDKDDFYNELNTISEARHKNLVKLEGWCCHINAW 239
>11_08_0037 +
27859867-27860382,27860471-27861440,27861647-27861991,
27862074-27862693
Length = 816
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 284 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 385
KLLP VGFV RG V+ +K+++ P
Sbjct: 464 KLLPLDANKVGFVNVRGPHVQAPEKIMDGDYTGP 497
>11_06_0395 + 23088737-23088823,23090198-23090346,23090570-23090708,
23090795-23090889,23090967-23091080,23091674-23091803,
23091931-23092052,23092889-23093007,23093946-23094034,
23094072-23094245,23094310-23094616,23094726-23095180,
23095334-23096315,23096381-23097396,23097757-23097792,
23098065-23098130
Length = 1359
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 125 YPKCFI--VGADNVGSQQMQQIRISLRGSSIV 214
Y KC I VG DN+ Q MQQ R SL I+
Sbjct: 1292 YTKCLIISVGRDNIPWQWMQQNRTSLETLEIL 1323
>08_02_1369 -
26445725-26445812,26446443-26446529,26446720-26446928,
26447501-26447583,26447672-26447720,26447800-26447959,
26448795-26448891,26449424-26449535,26449637-26449702,
26450135-26450206,26450413-26450487,26451139-26451266,
26451551-26451772,26452084-26452355,26452447-26452543,
26452633-26452738,26454834-26455220
Length = 769
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 295 WQQFLEGWIVVQVVFDGFAHHCV 227
W FLEGW V F+G A H V
Sbjct: 356 WSPFLEGWNSPAVQFEGPAVHVV 378
>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
Length = 554
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 83 KSNYFVKIIQLLDEYPKCF 139
+++Y VKII+LL EY CF
Sbjct: 68 RADYKVKIIELLKEYVDCF 86
>02_01_0152 -
1070249-1070296,1070443-1070515,1070601-1070671,
1070768-1070874,1071836-1072007
Length = 156
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 224 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLE 367
K T RK HL N AL K+ V +G L+E+ D+L++
Sbjct: 86 KVTGKRKRNAQHLQENSALCKVCTSSNSFVVRCCVKGSLLEINDRLIK 133
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 8 CLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPK 133
CL L+F T R R K T K + II++L+ YP+
Sbjct: 812 CLFLEFLMLMTCTTIRNSRSFKFTHKKFGYWMIIEMLNSYPR 853
>09_04_0351 +
16904075-16904738,16906285-16906366,16906533-16906697,
16906811-16906929,16906930-16907156
Length = 418
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 387 LVLVPLPHCESSFPPTT 437
+++VPLP C SSFP T
Sbjct: 215 IIVVPLPACTSSFPAFT 231
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 211 RAHGKKHNDAQSHQRPPGQQSSPRETVA 294
R+H K+H A SH P +SP T A
Sbjct: 103 RSHKKRHPPAGSHPHRPNATASPDSTPA 130
>12_02_0723 -
22532379-22532902,22533060-22533135,22533195-22533380,
22533459-22534323,22534740-22534918,22535168-22535542
Length = 734
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 191 SLRGSSIVLMGKNT-MMRKAIKDHLDNNPALEKLL 292
SLR +I MG+NT ++ +A+KD+ N ALE LL
Sbjct: 700 SLRHVTIDYMGENTAVIEEALKDY-PNQAALELLL 733
>03_02_0600 -
9748382-9748933,9749805-9749840,9751164-9751218,
9751588-9751697,9751955-9752602
Length = 466
Score = 26.6 bits (56), Expect = 9.1
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 167 QQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLV 343
+Q+Q IR +L + +L+ KNT++ KAI + P E L P +KG ++F + V
Sbjct: 74 KQLQGIRDTLPETCRLLVAKNTLVGKAI----EGTP-WEALKPCMKGMNAWLFVHTEEV 127
>02_03_0134 - 15596379-15597689
Length = 436
Score = 26.6 bits (56), Expect = 9.1
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 138 SSWVPITWARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLA 317
S W P ARNR S+ ++R A S + +K+ ++P + T +AT
Sbjct: 114 SVWPPALTARNRSSKDMNR-TAKSSSAMQKSNLSSRPGVDKMAASSAKQ---RTQKATPG 169
Query: 318 SCSPAET-SLRSVTNCWRTKSKLQLVLVPLPHCESSFPPTTP 440
+ + +T ++ SV T K V +P + + P+ P
Sbjct: 170 ALAGGKTQAVPSVRAPGTTTKKTMGVANSVPSIQRTSIPSRP 211
>01_06_0845 -
32389889-32389909,32390074-32390241,32390334-32390453,
32390982-32391068,32391149-32391217,32391448-32391510,
32391648-32391989,32392245-32392337,32392457-32392660,
32392910-32393154,32393249-32393414
Length = 525
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 175 AADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQRWLRVH 327
++ P+LA L++ + KKH + + + +Q + ++T A H Q RVH
Sbjct: 411 SSQPHLAHDLRWEMNKKKHRNLEKFAKTTEKQDTQKKT-AHHMAQN--RVH 458
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,838,789
Number of Sequences: 37544
Number of extensions: 322955
Number of successful extensions: 979
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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