Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2211
         (611 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.2  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   7.2  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 313 FPLSMPSIQPYRNDCYVW 260
           F LS+ +I+PY N+ Y+W
Sbjct: 132 FQLSLKNIEPY-NNYYIW 148


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 313 FPLSMPSIQPYRNDCYVW 260
           F LS+ +I+PY N+ Y+W
Sbjct: 132 FQLSLKNIEPY-NNYYIW 148


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 463  AVAMGKVEIQ-VHKEEPLPAGLGSRPRRKNY 552
            A A  K + Q  +K +P   G G+RP+R  Y
Sbjct: 1010 AQAQAKPQSQEANKPKPATGGKGTRPKRGKY 1040


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -3

Query: 324 ETLFFRFQCPVSS---HTVMIATSGSHPSYSRFLRLPY 220
           +T  F +  P++S    T+M +   + P  +RF  LPY
Sbjct: 283 KTAEFDWNKPINSGFYSTIMYSNGVTFPQRNRFSSLPY 320


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -3

Query: 324 ETLFFRFQCPVSS---HTVMIATSGSHPSYSRFLRLPY 220
           +T  F +  P++S    T+M +   + P  +RF  LPY
Sbjct: 283 KTAEFDWNKPINSGFYSTIMYSNGVTFPQRNRFSSLPY 320


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -2

Query: 196 RQ*HLKRRNRPPERSQPTLSISPALHKDLLLLTGYRLYRIPIC 68
           R+ H K R    +  +     S  LH+ + + TG R ++  +C
Sbjct: 139 RRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVC 181


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 127 PVILKESAATALVDGCDALGATVGNFCMDVAI 222
           P  + ++   ALV G   +G  +GN  + VA+
Sbjct: 35  PYTVTQAILIALVLGSIIVGTVIGNILVCVAV 66


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 216 RDKEGAGSGSR 248
           +DK+ AGSGSR
Sbjct: 582 KDKKNAGSGSR 592


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 117 LCKAGDIERVGCDRSGGRLRRFRCYCRKLLYGCRD 221
           LC    ++R   D+   R   +RC   + +Y  R+
Sbjct: 15  LCSKASLKRHVADKHAERQEEYRCVICERVYCSRN 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,987
Number of Sequences: 438
Number of extensions: 3007
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)