Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2210
(480 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 94 6e-20
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 56 1e-08
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 55 3e-08
06_01_0671 - 4899611-4899829,4900870-4901448 55 3e-08
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 36 0.017
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 34 0.069
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 30 1.1
07_03_0575 - 19637277-19637681 29 1.5
05_01_0210 + 1583176-1584177 29 1.5
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975... 29 1.5
02_04_0275 - 21469391-21470650 29 2.6
07_03_1569 - 27792739-27794175 28 4.5
02_01_0449 - 3229260-3229365,3230264-3230396,3230536-3230625,323... 28 4.5
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 28 4.5
08_01_0189 + 1578935-1578950,1579227-1579390,1579493-1579605,157... 27 6.0
07_01_0069 + 505291-505327,505726-505956,506317-506652,507025-50... 27 6.0
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 27 6.0
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 27 6.0
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 27 7.9
02_02_0154 + 7263707-7263782,7263908-7264248 27 7.9
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 93.9 bits (223), Expect = 6e-20
Identities = 44/69 (63%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +2
Query: 74 APQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 250
AP F A AV + EF ++ LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ DEF K+
Sbjct: 74 APDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNT 133
Query: 251 EVLGAFTDS 277
E+LG DS
Sbjct: 134 EILGVSIDS 142
Score = 70.5 bits (165), Expect = 6e-13
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +2
Query: 281 FTHLAWINTPRKQGGLGPMNIPLISDKSHRIFRDYRVLDQETGIPFRGLFIIDDKQNLRQ 460
F+HLAW+ T RK GGLG + PLISD + I + + VL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 461 ITINDL 478
TIN+L
Sbjct: 272 STINNL 277
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 56.0 bits (129), Expect = 1e-08
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +2
Query: 122 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGAFTDSHFTHLAW 298
I + D+ G YV+LF +P DFT VC TE+ A + A EF K G ++LG D +H W
Sbjct: 57 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDW 116
Query: 299 INTPRKQGGLGPMNIPLISDKSHRIFRDYRVLDQE 403
I + P+++D S + ++D +
Sbjct: 117 IKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPD 151
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +2
Query: 122 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGAFTDSHFTHLAW 298
I L D+ G YV++F +P DFT VC TE+ + A EF K G ++LG D +H W
Sbjct: 22 IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDW 81
Query: 299 INTPRKQGGLGPMNIPLISDKSHRIFRDYRVLDQE 403
I + P+++D R ++D +
Sbjct: 82 IKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDAD 116
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 54.8 bits (126), Expect = 3e-08
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +2
Query: 122 ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGAFTDSHFTHLAWI 301
+SLS +KG+ VV++FYP D T C + AF + ++F+K G EV+G D +H +
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEF- 195
Query: 302 NTPRKQGGLGPMNIPLISDKSHRIFRDYRV-LDQETGIPFRGLFIIDDKQNLRQITIND 475
+K+ L P L+SD+ +++ +++ V D +P R +++ DK + Q N+
Sbjct: 196 ---KKKYKL-PFT--LLSDEGNKVRKEWGVPADLFGTLPGRQTYVL-DKNGVVQYIYNN 247
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 35.9 bits (79), Expect = 0.017
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 185 FVCPTEIIAFSEKADEFRKIGCEVLGAFTDS 277
FV EI AFS++ +EF KI EVLG DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 407 GIPFRGLFIIDDKQNLRQITINDL 478
GI RGLFIID + ++ TIN+L
Sbjct: 80 GIALRGLFIIDKEGVIQHSTINNL 103
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 33.9 bits (74), Expect = 0.069
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = -3
Query: 478 QVVDRDLPEVLLVVDDKESSKGNAGLLVQ--HSVVAENAVRLVAYQRNVHGAESA 320
++V + L E L++D ESSK NAG ++ +V+ + V+YQ+ +HG SA
Sbjct: 224 EIVPKLLREDSLLIDYLESSKTNAGYVMDMAKAVIFPLPLVAVSYQQLIHGCSSA 278
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 292 RLDQHAAQAGRTRPHEHSSDKRQVAPHFPRLPSAGPGDRHSLSRTLYHRRQAEPQADHDQ 471
R D H A++ R +P EH DK++ + P+ GDR Y +R P AD D
Sbjct: 182 RKDTHRAKSPRRQPKEHEVDKKRRS----YSPANKDGDRRDADNG-YEKR--SPPADSDG 234
Query: 472 RP 477
P
Sbjct: 235 SP 236
>07_03_0575 - 19637277-19637681
Length = 134
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = -1
Query: 360 LSLIRGMFMGPSPPCLRGVLIQARCVKCESVKAPSTSQPILRNSSAFSENAMISVGHT 187
+ + G P C R V + K ESV A + +L N F NA VG T
Sbjct: 49 IKFLSNKLSGHEPTCKRIVAVGTGSSKSESVVAVDKVESMLCNLDRFEANAQHEVGPT 106
>05_01_0210 + 1583176-1584177
Length = 333
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/67 (37%), Positives = 32/67 (47%)
Frame = -3
Query: 349 QRNVHGAESALLARRVDPGEVRKVRVGEGPEHLAADLAELVRFLRERDDLRRAHEREVQR 170
+R + AE+ RR E R V G E LA LVR RER+D RA R +R
Sbjct: 259 ERWMEAAEAREAERRAREEEWRTAMVALGEERLA-----LVRRWREREDAWRA--RAEER 311
Query: 169 IEEQHNI 149
E +H +
Sbjct: 312 EERRHQL 318
>03_02_0602 +
9759055-9759223,9759305-9759455,9759548-9759593,
9759974-9760033,9760519-9760555,9761268-9761347,
9761413-9761516,9761613-9761673,9762962-9763019,
9763866-9763918,9764357-9765320,9766131-9766185,
9767223-9768786
Length = 1133
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = -1
Query: 423 PRKGMPVSWSSTR*SRKMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVKAPSTSQ- 247
P P ++ST S D + RG+ G PP L C++C SV A +
Sbjct: 369 PSAAAPTGFASTDRSGGAGRDRAFARGICFGDPPPALS----PQYCLRCLSVAAKELADG 424
Query: 246 -PILRNSSAFSENAMISVGHTNVKS 175
P R ++ +++ S T+ S
Sbjct: 425 CPAKRRAAVWTDGCFASFADTSALS 449
>02_04_0275 - 21469391-21470650
Length = 419
Score = 28.7 bits (61), Expect = 2.6
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -3
Query: 424 SSKGNAGLLVQHSVVAENAVRLVAYQRNVHGAESALLARRVDPGEVRKVRVGEGPEHLAA 245
SS+ + G + + A N R + V+GA+S + + R GE E +
Sbjct: 222 SSESSDGFPPEPPMAAANGKRRREVEEEVNGADSGHRTQGLRELAQAIRRFGEVYERV-- 279
Query: 244 DLAELVRFLR-ERDDLRRAHEREVQRIE 164
+LA+ + LR ERD L A E E QR++
Sbjct: 280 ELAKREQELRMERDRLEAARELEDQRVQ 307
>07_03_1569 - 27792739-27794175
Length = 478
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 394 QHSVVAENAVRLVAYQRNVHGAESALLARRVDPGEVRKVRVGEGPEHLAADLAELVRFL 218
+H V A+R + G +AL AR GE + V EG L D+ +LV +L
Sbjct: 419 RHDVTPAAAIREAIERAMASGDGAALRARAAAIGEAVRAAVAEGGS-LRQDMDDLVAYL 476
>02_01_0449 -
3229260-3229365,3230264-3230396,3230536-3230625,
3231097-3231309,3232317-3232407,3232519-3232707,
3232810-3232920,3233018-3233110
Length = 341
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 98 VVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFR-KIGCEVLGAF 268
++N + K ++ D+ GK+ +L+F +CP E+ + D+ + K EV+ F
Sbjct: 187 LLNHDGKPVTQKDFFGKWTLLYFGFTHCPDICPDELQKMALAIDKIKEKAKMEVVPVF 244
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 311 RKQGGLGPMNIPLISDKSHRIFRDYRVLDQETGIPFRGLFIIDDKQNLRQITI 469
+K+ G G N+P D R +DY +D++ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>08_01_0189 +
1578935-1578950,1579227-1579390,1579493-1579605,
1579850-1580399,1580514-1580813,1581093-1581133,
1581359-1581606,1581983-1582086,1582177-1582323
Length = 560
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 292 RLDQHAAQAGRTRPHEHSSDKRQVAPHFPRLPSAGPGDRHSLSRTLYHRR 441
+L+ A+ P E D +++ PH P+ S+ P ++ +L H+R
Sbjct: 17 QLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNADKPSLKHQR 66
>07_01_0069 +
505291-505327,505726-505956,506317-506652,507025-507372,
507735-508594,508902-508971,509157-509371,509477-509537,
509606-509715,510644-510694,510794-510916
Length = 813
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -3
Query: 349 QRNVHGAESALLARRVDPGEVRKVRVGEGPEHLAADLAELVRFLRERDDLRRAHEREVQR 170
+RN A +R+D GE V V +G + A L++ +R ++ +AH+ +
Sbjct: 504 KRNQTSVPEAPSVQRMDLGETASVGVMDGECEVQAVLSDCQSARSDRSNIAQAHKENFRH 563
Query: 169 I 167
I
Sbjct: 564 I 564
>05_07_0332 -
29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 27.5 bits (58), Expect = 6.0
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = -3
Query: 331 AESALLARRVDPGEVRKVRVGE--GPEHLAADLAELVRFLRERDDLRRAHEREVQRIEEQ 158
A S +R ++ GE RVG P LA + A+ LR+ D+R +RE+ +E+
Sbjct: 49 AASPPRSREMEVGEDGVKRVGNKSSPRSLAIEKAQ--EELRQEHDVREERKRELDFLEKG 106
Query: 157 HNIFPLVVRQRNVLELSV 104
N PL + +V +SV
Sbjct: 107 GN--PLDFKFVHVASVSV 122
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 27.5 bits (58), Expect = 6.0
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = -3
Query: 292 EVRKVRVGEGPEHLAADLAELVRFLRERDDLRRAHEREVQRIEEQHNIFPLVVRQRNVLE 113
E RK R E E + E R RE+++ +R E E +R EE+ R+R E
Sbjct: 503 EERKRREEEEKERREREEEE--RRQREKEEKKRREEEEQRREEEEEE------RRREEEE 554
Query: 112 LSVDDGRGLE 83
+DGRG E
Sbjct: 555 EEQEDGRGDE 564
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 323 GLGPMNIPLISDKSHRIFRDYRVLDQETGIPFRGLFIIDD-KQNLRQITINDL 478
G+GP + DK HR D + D T GL DD KQ + + ++++
Sbjct: 1636 GVGPATALKLYDKGHRTLDDLQKDDSLTSAQRIGLKFFDDIKQRIPRHEVSEM 1688
>02_02_0154 + 7263707-7263782,7263908-7264248
Length = 138
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 414 GMPVSWSSTR*SRKMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVKAPSTS 250
G+ + +T S K C LSL + PS CL+ A + C + AP S
Sbjct: 25 GVIATSKATSKSYKAACTLSLATCLPSLPSDKCLKAAFAAATSLLCLTAGAPPPS 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,493,247
Number of Sequences: 37544
Number of extensions: 252139
Number of successful extensions: 940
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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