Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2210
         (480 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.2  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   3.0  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   3.0  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   3.0  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           22   3.9  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   5.2  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   9.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 92   TAVVNGEFKDISLSDY 139
            T +++  FKD+ LSD+
Sbjct: 1401 TPIMDAHFKDVKLSDF 1416


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 152 VVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 259
           V +   P++  F  P E     E+AD  R++ C++L
Sbjct: 15  VAIMAAPVEDEFE-PLEHFENEERADRHRRVTCDLL 49


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 152 VVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 259
           V +   P++  F  P E     E+AD  R++ C++L
Sbjct: 15  VAIMAAPVEDEFE-PLEHFENEERADRHRRVTCDLL 49


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/53 (20%), Positives = 21/53 (39%)
 Frame = +2

Query: 215 SEKADEFRKIGCEVLGAFTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRI 373
           S   ++ +K+GC     F   HF     +N  + + G   +     ++  H I
Sbjct: 43  SNSEEQMKKLGCFEACVFQKLHFMDGNTLNVEKLESGTRELTPDDFTEDVHEI 95


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 194 PTEIIAFSEKADEFRKIGCEVL 259
           P E     E+AD  R++ C++L
Sbjct: 3   PLEHFENEERADRHRRVTCDLL 24


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 96  AVALNWGAGLVICR 55
           A+ ++W AG V+CR
Sbjct: 99  AITVSWKAGDVMCR 112


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 215 SEKADEFRKIGCEVLGAFTDSHFTHL 292
           +E+ +E+R + CE +    +S  TH+
Sbjct: 30  AERQEEYRCVICERVYCSRNSLMTHI 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,149
Number of Sequences: 438
Number of extensions: 2383
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)