Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2200
         (808 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              25   0.83 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   4.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   4.4  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   5.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   7.7  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = -2

Query: 219 LAHDETTNVAEFQ---LRYRIRFVGQTL*IVSQIKADQYG 109
           L + E +++ EF+    +YR + +G+T   +  ++A +YG
Sbjct: 21  LVYGEISDIDEFREMTSKYRKKCIGETKTTIEDVEATEYG 60


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +2

Query: 593 TESLKILSTQSVGARNLLEPMQANATKI 676
           TESL+++ T +  AR L EP++ +  ++
Sbjct: 386 TESLRLIPTTTCIARILDEPIELSGYRL 413


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 110 VDAILLTFFMLVLRPIFIIKFLN 42
           V+  +  FFM++  PIFI    N
Sbjct: 88  VNLAICDFFMMIKTPIFIYNSFN 110


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 415 YGHWQQQQHVANTKKPPQQTAG 480
           YG+ QQQQ  A T++  Q   G
Sbjct: 110 YGNPQQQQLAAETQQQQQHNNG 131


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 703 VDRFDSIQLNFGRVGLHRFQQIARSDRLSRQN 608
           +DR D++        + R  +I R DR+ R N
Sbjct: 498 MDRMDTMDRTDKMSRIDRMDKIDRMDRMDRTN 529


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,623
Number of Sequences: 438
Number of extensions: 4175
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)