Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2199
         (803 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P30154 Cluster: Serine/threonine-protein phosphatase 2A...    42   0.018
UniRef50_A4S055 Cluster: Predicted protein; n=1; Ostreococcus lu...    36   1.2  
UniRef50_Q6C3C5 Cluster: Yarrowia lipolytica chromosome F of str...    34   3.6  
UniRef50_A0QRY4 Cluster: Hypothetical cytosolic protein; n=2; My...    33   6.4  
UniRef50_Q9B6D2 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    33   8.4  
UniRef50_A3LQ74 Cluster: Predicted protein; n=4; Saccharomycetal...    33   8.4  
UniRef50_Q9B6D3 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    33   8.4  

>UniRef50_P30154 Cluster: Serine/threonine-protein phosphatase 2A 65
           kDa regulatory subunit A beta isoform; n=121;
           Eukaryota|Rep: Serine/threonine-protein phosphatase 2A
           65 kDa regulatory subunit A beta isoform - Homo sapiens
           (Human)
          Length = 601

 Score = 41.9 bits (94), Expect = 0.018
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           VKPVL+KL  D D+DVKYFA EAI+ +A
Sbjct: 572 VKPVLQKLGQDEDMDVKYFAQEAISVLA 599


>UniRef50_A4S055 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 603

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           ++P+L  L  DPD DV+YFASE +   A
Sbjct: 576 IRPILVGLQSDPDADVRYFASEVLTSAA 603


>UniRef50_Q6C3C5 Cluster: Yarrowia lipolytica chromosome F of strain
           CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome F of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 622

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           V P LE+L+ D DVDV+YF+++A+  IA
Sbjct: 588 VIPHLERLSTDGDVDVRYFSTKALEDIA 615


>UniRef50_A0QRY4 Cluster: Hypothetical cytosolic protein; n=2;
           Mycobacterium|Rep: Hypothetical cytosolic protein -
           Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
          Length = 389

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = -1

Query: 83  RLRREVLDVDVGVHVQLLQDRLDWGWM 3
           +L RE+++  +G  V+L Q+R+DWGW+
Sbjct: 349 QLYRELVEDSLGDRVRLEQERIDWGWV 375


>UniRef50_Q9B6D2 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=2; Yarrowia lipolytica|Rep: NADH-ubiquinone
           oxidoreductase chain 5 - Yarrowia lipolytica (Candida
           lipolytica)
          Length = 722

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -1

Query: 335 DFFFILSINIVGNELGLFNYCKVYLTSYMMNV*NNYAFCFICSNFFVIKKNQESIILHN- 159
           D FF+L + ++    G  NY  ++ T+Y++N   +     + + F           LHN 
Sbjct: 178 DAFFVLGLCVIAYVFGTLNYSTIFATAYLIN--TDLLVLIMLALFIAAMAKSAQFGLHNW 235

Query: 158 -TVLMFGP 138
            T+ M GP
Sbjct: 236 LTLAMEGP 243


>UniRef50_A3LQ74 Cluster: Predicted protein; n=4;
           Saccharomycetales|Rep: Predicted protein - Pichia
           stipitis (Yeast)
          Length = 630

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 14/23 (60%), Positives = 20/23 (86%)
 Frame = +3

Query: 27  LEKLNVDPDVDVKYFASEAIAGI 95
           LEKL+ D DVDV+++AS++I GI
Sbjct: 603 LEKLSNDTDVDVRFYASKSIQGI 625


>UniRef50_Q9B6D3 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=4; Fungi/Metazoa group|Rep: NADH-ubiquinone
           oxidoreductase chain 5 - Yarrowia lipolytica (Candida
           lipolytica)
          Length = 655

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -1

Query: 335 DFFFILSINIVGNELGLFNYCKVYLTSYMMNV*NNYAFCFICSNFFVIKKNQESIILHN- 159
           D FF+L + ++    G  NY  ++ T+Y++N   +     + + F           LHN 
Sbjct: 178 DAFFVLGLCVIAYVFGTLNYSTIFATAYLIN--TDLLVLIMLALFIAAMAKSAQFGLHNW 235

Query: 158 -TVLMFGP 138
            T+ M GP
Sbjct: 236 LTLAMEGP 243


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,275,554
Number of Sequences: 1657284
Number of extensions: 12837371
Number of successful extensions: 23539
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23537
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)