Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2199
         (803 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027596-1|AAH27596.1|  667|Homo sapiens protein phosphatase 2 (...    42   0.002
M65254-1|AAA59983.1|  575|Homo sapiens protein phosphatase-2A re...    42   0.003
AF163473-1|AAG39644.1|  601|Homo sapiens protein phosphatase 2A ...    42   0.003
AF087438-1|AAC69624.1|  601|Homo sapiens protein phosphatase 2 s...    42   0.003
AF083439-1|AAC63525.1|  601|Homo sapiens protein phosphatase 2A ...    42   0.003
M31786-1|AAA35531.1|  589|Homo sapiens protein ( Human medium tu...    42   0.003
J02902-1|AAA36399.1|  589|Homo sapiens phosphatase 2A regulatory...    42   0.003
CR450340-1|CAG29336.1|  589|Homo sapiens PPP2R1A protein.              42   0.003
BC001537-1|AAH01537.1|  589|Homo sapiens protein phosphatase 2 (...    42   0.003
AK091387-1|BAC03652.1|  509|Homo sapiens protein ( Homo sapiens ...    42   0.003

>BC027596-1|AAH27596.1|  667|Homo sapiens protein phosphatase 2
           (formerly 2A), regulatory subunit A, beta isoform
           protein.
          Length = 667

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           VKPVL+KL  D D+DVKYFA EAI+ +A
Sbjct: 572 VKPVLQKLGQDEDMDVKYFAQEAISVVA 599


>M65254-1|AAA59983.1|  575|Homo sapiens protein phosphatase-2A
           regulatory subunit-beta protein.
          Length = 575

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           VKPVL+KL  D D+DVKYFA EAI+ +A
Sbjct: 546 VKPVLQKLGQDEDMDVKYFAQEAISVLA 573


>AF163473-1|AAG39644.1|  601|Homo sapiens protein phosphatase 2A
           regulatory subunit A beta isoform protein.
          Length = 601

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           VKPVL+KL  D D+DVKYFA EAI+ +A
Sbjct: 572 VKPVLQKLGQDEDMDVKYFAQEAISVLA 599


>AF087438-1|AAC69624.1|  601|Homo sapiens protein phosphatase 2
           subunit A isoform beta protein.
          Length = 601

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           VKPVL+KL  D D+DVKYFA EAI+ +A
Sbjct: 572 VKPVLQKLGQDEDMDVKYFAQEAISVLA 599


>AF083439-1|AAC63525.1|  601|Homo sapiens protein phosphatase 2A
           regulatory subunit A, beta isoform protein.
          Length = 601

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           VKPVL+KL  D D+DVKYFA EAI+ +A
Sbjct: 572 VKPVLQKLGQDEDMDVKYFAQEAISVLA 599


>M31786-1|AAA35531.1|  589|Homo sapiens protein ( Human medium tumor
           antigen-associated 61-kD protein mRNA, 5' end. ).
          Length = 589

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAI 86
           VKP+LEKL  D DVDVKYFA EA+
Sbjct: 560 VKPILEKLTQDQDVDVKYFAQEAL 583


>J02902-1|AAA36399.1|  589|Homo sapiens phosphatase 2A regulatory
           subunit protein.
          Length = 589

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAI 86
           VKP+LEKL  D DVDVKYFA EA+
Sbjct: 560 VKPILEKLTQDQDVDVKYFAQEAL 583


>CR450340-1|CAG29336.1|  589|Homo sapiens PPP2R1A protein.
          Length = 589

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAI 86
           VKP+LEKL  D DVDVKYFA EA+
Sbjct: 560 VKPILEKLTQDQDVDVKYFAQEAL 583


>BC001537-1|AAH01537.1|  589|Homo sapiens protein phosphatase 2
           (formerly 2A), regulatory subunit A , alpha isoform
           protein.
          Length = 589

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAI 86
           VKP+LEKL  D DVDVKYFA EA+
Sbjct: 560 VKPILEKLTQDQDVDVKYFAQEAL 583


>AK091387-1|BAC03652.1|  509|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34068 fis, clone FCBBF3001918, highly similar to
           SERINE/THREONINE PROTEIN PHOSPHATASE 2A, 65 KDA
           REGULATORY ).
          Length = 509

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +3

Query: 15  VKPVLEKLNVDPDVDVKYFASEAI 86
           VKP+LEKL  D DVDVKYFA EA+
Sbjct: 480 VKPILEKLTQDQDVDVKYFAQEAL 503


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,928,034
Number of Sequences: 237096
Number of extensions: 1913381
Number of successful extensions: 2475
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2475
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)