Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2199
         (803 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M86442-1|AAA28304.1|  591|Drosophila melanogaster protein phosph...    49   9e-06
BT021405-1|AAX33553.1|  503|Drosophila melanogaster LD10247p pro...    49   9e-06
AE014134-1474|AAZ66587.1|  591|Drosophila melanogaster CG17291-P...    49   9e-06
AE014134-1473|AAF52650.2|  591|Drosophila melanogaster CG17291-P...    49   9e-06

>M86442-1|AAA28304.1|  591|Drosophila melanogaster protein
           phosphatase 2A 65 kDaregulatory subunit protein.
          Length = 591

 Score = 48.8 bits (111), Expect = 9e-06
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3

Query: 9   APVKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           A VKP L+KLN D DVDVK+FA++AIAGIA
Sbjct: 560 AQVKPTLDKLNTDTDVDVKHFAAQAIAGIA 589


>BT021405-1|AAX33553.1|  503|Drosophila melanogaster LD10247p
           protein.
          Length = 503

 Score = 48.8 bits (111), Expect = 9e-06
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3

Query: 9   APVKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           A VKP L+KLN D DVDVK+FA++AIAGIA
Sbjct: 472 AQVKPTLDKLNTDTDVDVKHFAAQAIAGIA 501


>AE014134-1474|AAZ66587.1|  591|Drosophila melanogaster CG17291-PB,
           isoform B protein.
          Length = 591

 Score = 48.8 bits (111), Expect = 9e-06
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3

Query: 9   APVKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           A VKP L+KLN D DVDVK+FA++AIAGIA
Sbjct: 560 AQVKPTLDKLNTDTDVDVKHFAAQAIAGIA 589


>AE014134-1473|AAF52650.2|  591|Drosophila melanogaster CG17291-PA,
           isoform A protein.
          Length = 591

 Score = 48.8 bits (111), Expect = 9e-06
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3

Query: 9   APVKPVLEKLNVDPDVDVKYFASEAIAGIA 98
           A VKP L+KLN D DVDVK+FA++AIAGIA
Sbjct: 560 AQVKPTLDKLNTDTDVDVKHFAAQAIAGIA 589


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,094,293
Number of Sequences: 53049
Number of extensions: 556465
Number of successful extensions: 1065
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)