Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2198
         (555 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain (pr...    33   0.14 
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr...    32   0.24 
AC024750-3|AAF60440.1|  384|Caenorhabditis elegans Hypothetical ...    31   0.74 
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z95621-2|CAB09131.1|  330|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z78019-9|CAB01457.1|  330|Caenorhabditis elegans Hypothetical pr...    27   6.9  

>U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 7 protein.
          Length = 491

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -1

Query: 303 IRRTAF*FLGGGRGIGTIASLRRLRKRRHEFHGIYIQRGN 184
           I R A  +L  GRG   I  L R+ + + +F+G  IQRGN
Sbjct: 63  IYRRATTYLAMGRGKAAIVDLERVLELKPDFYGARIQRGN 102


>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
           protein T20F7.5 protein.
          Length = 1065

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 15/62 (24%), Positives = 32/62 (51%)
 Frame = +1

Query: 79  SATIMSNNGAPDSWENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDST 258
           S+ ++SN+   DS     + +      +++D+ S IST     +  + S S PS+ + S+
Sbjct: 245 SSAVLSNSNTSDSINTSEQNLESPRTSEASDILSTISTFTQENVSELQSISPPSEENGSS 304

Query: 259 DS 264
           ++
Sbjct: 305 EN 306


>AC024750-3|AAF60440.1|  384|Caenorhabditis elegans Hypothetical
           protein Y17G9A.4 protein.
          Length = 384

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = +1

Query: 19  EQNLNNFN*PGKKTKLFILRSATIMSNN-GAPDSWENEAEIIGEKGAK---DSNDVSSKI 186
           EQ + ++N PGK + + I RS    S    A D+ ENE +II  +G     D NDV  K+
Sbjct: 122 EQYITSYN-PGK-SNIVIYRSHYWRSTTENAKDNIENEVKIICAEGLNKQPDYNDVPVKL 179

Query: 187 STLNVNAMEFVPSFSKPSQAS 249
           S  N+    FV    K    S
Sbjct: 180 SE-NLENSRFVGLMGKDLDVS 199


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +1

Query: 112  DSWENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTSPQ 279
            D+ EN+ EI  E   +     SSK+ST  +N  +        + + DS D   +P+
Sbjct: 999  DATENQPEITLELDVEKHEIDSSKVSTSTINLNDESMETRNTNDSKDSFDDEVNPR 1054


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +1

Query: 112  DSWENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTSPQ 279
            D+ EN+ EI  E   +     SSK+ST  +N  +        + + DS D   +P+
Sbjct: 999  DATENQPEITLELDVEKHEIDSSKVSTSTINLNDESMETRNTNDSKDSFDDEVNPR 1054


>Z95621-2|CAB09131.1|  330|Caenorhabditis elegans Hypothetical
           protein ZK863.2 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 428 SGGTDAVVGGGSSTRGEADA 369
           SGG+D+ VGGG  T    D+
Sbjct: 256 SGGSDSAVGGGGDTNASTDS 275


>Z78019-9|CAB01457.1|  330|Caenorhabditis elegans Hypothetical
           protein ZK863.2 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 428 SGGTDAVVGGGSSTRGEADA 369
           SGG+D+ VGGG  T    D+
Sbjct: 256 SGGSDSAVGGGGDTNASTDS 275


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.313    0.128    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,130,459
Number of Sequences: 27780
Number of extensions: 180827
Number of successful extensions: 540
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)