Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2197
         (389 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    44   0.001
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    43   0.002
UniRef50_Q5ZEP9 Cluster: Putative uncharacterized protein; n=2; ...    32   3.4  
UniRef50_Q6D388 Cluster: Putative exported protein; n=1; Pectoba...    31   6.0  
UniRef50_Q2TYJ7 Cluster: Predicted protein; n=1; Aspergillus ory...    31   6.0  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 43.6 bits (98), Expect = 0.001
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = -1

Query: 200 AGWWYLPVRTHKRSYHQYVDCLQHGI 123
           A WWYLP RTHKRSYH+Y  C   G+
Sbjct: 569 AEWWYLPARTHKRSYHRY-QCSYCGV 593


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 43.2 bits (97), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -3

Query: 387 FFLFRLVDELTAHLMLSGYWSP 322
           F L R VDELTAHL+LSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q5ZEP9 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 281

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +2

Query: 80  GRLPLSRRRYLF*-RGFHAVNNQHTGGRTSCES-ARVGTTTPPISA 211
           GRLPL R++Y+   R  HA+  + TGGR    + A   ++ P IS+
Sbjct: 173 GRLPLERQKYMHESRRQHALKRRRTGGRFDANAEAAAASSEPSISS 218


>UniRef50_Q6D388 Cluster: Putative exported protein; n=1;
           Pectobacterium atrosepticum|Rep: Putative exported
           protein - Erwinia carotovora subsp. atroseptica
           (Pectobacterium atrosepticum)
          Length = 116

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 228 FRSEGWGSRCNYTEILELIPQGGWRIYV 311
           F+S+ WG+ CN  EI+    QG W   V
Sbjct: 88  FKSKNWGAACNVLEIIVETDQGIWEFQV 115


>UniRef50_Q2TYJ7 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 292

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 141 LFTAWNPRQKRYRRRLRGSRPNLVRRTHCRSEEPVEL 31
           L   W  +   YR  LR   P  +RR H R+++P  L
Sbjct: 158 LLIEWGAQANFYRGNLRDDNPGRIRRRHSRAKDPPPL 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,704,823
Number of Sequences: 1657284
Number of extensions: 7042794
Number of successful extensions: 15010
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15007
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)