Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2197
         (389 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein.               29   7.1  
DQ868973-1|ABJ16061.1|  227|Homo sapiens CARD15 protein.               29   7.1  
BC062582-1|AAH62582.1| 1040|Homo sapiens DNA cross-link repair 1...    29   7.1  
BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1...    29   7.1  
AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1...    29   7.1  
AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1...    29   7.1  
AJ303140-1|CAC42117.1| 1013|Homo sapiens LRR-containing protein ...    29   7.1  
AF178930-1|AAG33677.1| 1040|Homo sapiens NOD2 protein protein.         29   7.1  

>D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein.
          Length = 1044

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 225  AFRSEGWGSRCNYTEILELIPQ--GGWRIYVVMFMGSSNHL 341
            AFR  GW     +T I ++IPQ  G   IY + +   S++L
Sbjct: 962  AFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYL 1002


>DQ868973-1|ABJ16061.1|  227|Homo sapiens CARD15 protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 141 LFTAWNPRQKRYRRRLRGSRPNLVRRTHCRSEEPVEL 31
           L   W+P      R L+  RP +VRR H   E  ++L
Sbjct: 92  LHGCWDPHSLHPARDLQSHRPAIVRRLHSHVENMLDL 128


>BC062582-1|AAH62582.1| 1040|Homo sapiens DNA cross-link repair 1A
            (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 225  AFRSEGWGSRCNYTEILELIPQ--GGWRIYVVMFMGSSNHL 341
            AFR  GW     +T I ++IPQ  G   IY + +   S++L
Sbjct: 958  AFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYL 998


>BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1A
            (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 225  AFRSEGWGSRCNYTEILELIPQ--GGWRIYVVMFMGSSNHL 341
            AFR  GW     +T I ++IPQ  G   IY + +   S++L
Sbjct: 958  AFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYL 998


>AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1A
            (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 225  AFRSEGWGSRCNYTEILELIPQ--GGWRIYVVMFMGSSNHL 341
            AFR  GW     +T I ++IPQ  G   IY + +   S++L
Sbjct: 958  AFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYL 998


>AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1A
            (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 225  AFRSEGWGSRCNYTEILELIPQ--GGWRIYVVMFMGSSNHL 341
            AFR  GW     +T I ++IPQ  G   IY + +   S++L
Sbjct: 958  AFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYL 998


>AJ303140-1|CAC42117.1| 1013|Homo sapiens LRR-containing protein
           protein.
          Length = 1013

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 141 LFTAWNPRQKRYRRRLRGSRPNLVRRTHCRSEEPVEL 31
           L   W+P      R L+  RP +VRR H   E  ++L
Sbjct: 92  LHGCWDPHSLHPARDLQSHRPAIVRRLHSHVENMLDL 128


>AF178930-1|AAG33677.1| 1040|Homo sapiens NOD2 protein protein.
          Length = 1040

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 141 LFTAWNPRQKRYRRRLRGSRPNLVRRTHCRSEEPVEL 31
           L   W+P      R L+  RP +VRR H   E  ++L
Sbjct: 119 LHGCWDPHSLHPARDLQSHRPAIVRRLHSHVENMLDL 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,526,640
Number of Sequences: 237096
Number of extensions: 1128620
Number of successful extensions: 1781
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1781
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)