Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2197
         (389 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1510|AAM68695.1|  555|Drosophila melanogaster CG8819-PC...    28   5.0  
AE013599-1507|AAO41402.1|  524|Drosophila melanogaster CG8821-PB...    28   5.0  

>AE013599-1510|AAM68695.1|  555|Drosophila melanogaster CG8819-PC,
           isoform C protein.
          Length = 555

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 231 ETHYCFTAEIGGVVVPTRADSQE 163
           ET YC+    GG+VV  R++ +E
Sbjct: 365 ETMYCYKDSYGGIVVSPRSEGEE 387


>AE013599-1507|AAO41402.1|  524|Drosophila melanogaster CG8821-PB,
           isoform B protein.
          Length = 524

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 231 ETHYCFTAEIGGVVVPTRADSQE 163
           ET YC+    GG+VV  R++ +E
Sbjct: 334 ETMYCYKDSYGGIVVSPRSEGEE 356


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,560,614
Number of Sequences: 53049
Number of extensions: 340382
Number of successful extensions: 576
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)