Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2197
         (389 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   0.94 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   2.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   3.8  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   6.6  

>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.4 bits (48), Expect = 0.94
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +1

Query: 1   VNEAYEYLSY-QFYRFF*SAVSPTNEIRSTPSQPTTISLLTRIPCCKQSTYWW*DLL*VR 177
           V+  + Y+++ Q   F  +  S +N I    S  +   + TR+P    +T WW       
Sbjct: 155 VDLVHNYMNFMQMDEFVVNLKSGSNTIERN-SHESXFVVPTRVPATCCTTXWWSXXTVAX 213

Query: 178 TGRYHHPAY 204
           T +Y    Y
Sbjct: 214 TFKYSSKPY 222


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 299 AHLRCNVYGLQ*PLNIRWA 355
           A+L+C V     PLNIRW+
Sbjct: 601 ANLQCIVPTGDLPLNIRWS 619


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 94  QPTTISLLTRIPCCK 138
           Q TT+++LT++ C K
Sbjct: 311 QKTTLNMLTQVECYK 325


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 158 YHQYVDCLQHGILVRR 111
           YH Y+  L  GI++R+
Sbjct: 127 YHLYMGLLSGGIILRK 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,272
Number of Sequences: 438
Number of extensions: 2173
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)