Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2196
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          27   0.64 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    27   0.64 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   2.6  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   7.9  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = -2

Query: 717 PAGRLRLEKGARGTARRQPPRATPQNRLPTKPHRAPPLRLHET 589
           P GR R    AR   RR  PRA       T+P R  P R   T
Sbjct: 489 PEGRRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKST 531


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 753  EEEDRGPPLLPIPAGRLRLEKGARGTARRQPPR 655
            EEE+  PP+ PIP    RL    R T  R+  R
Sbjct: 1098 EEEEVSPPVPPIPPRSRRLPPSPRTTEMRRRRR 1130


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -2

Query: 753 EEEDRGPPLLPIPAGRLR---LEKGARGTARRQPP--RATPQNRLPT 628
           ++E RGP  +   AGRLR   +   A    RR+PP  R   + R PT
Sbjct: 305 QQELRGPEAVREAAGRLRTGPVPGAAERHRRRRPPPRRRHDRRRYPT 351


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 171 PVLEAGSKMKRVVLRRIYHRSGIGTH*GDPARYHCK 278
           P  +  + ++ VV+   Y   GIGTH  +    +CK
Sbjct: 306 PADDTSAYVESVVVDYRYRGRGIGTHLMEEVEKYCK 341


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,160
Number of Sequences: 2352
Number of extensions: 15774
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)