Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2194
         (752 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    41   0.029
UniRef50_P04386 Cluster: Regulatory protein GAL4; n=3; Fungi/Met...    33   7.6  
UniRef50_Q64ZA6 Cluster: Putative uncharacterized protein; n=6; ...    33   10.0 
UniRef50_Q54B47 Cluster: Putative uncharacterized protein; n=1; ...    33   10.0 

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 41.1 bits (92), Expect = 0.029
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = -2

Query: 553 FLLLKWVDELTVHLVLSGY 497
           FLLL+WVDELT HLVLSGY
Sbjct: 154 FLLLRWVDELTAHLVLSGY 172


>UniRef50_P04386 Cluster: Regulatory protein GAL4; n=3;
           Fungi/Metazoa group|Rep: Regulatory protein GAL4 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 881

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 15/48 (31%), Positives = 31/48 (64%)
 Frame = +2

Query: 134 LFILQHIHF*LDHYTRTRINQIPTLKMNRMKNLSRYSSSAVMRHFSND 277
           L IL+ I F  ++YT + +N++PT+  +R    SR ++S +++ + N+
Sbjct: 203 LCILRSIGFKPENYTNSNVNRLPTMITDRYTLASRSTTSRLLQSYLNN 250


>UniRef50_Q64ZA6 Cluster: Putative uncharacterized protein; n=6;
           Bacteroidales|Rep: Putative uncharacterized protein -
           Bacteroides fragilis
          Length = 413

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +2

Query: 581 SSGRWWSLA*IRSIRSLRHNIIYTSILIL*RGKICLFVLNRLR 709
           S GRW  ++    +R     ++YT I ++  G +CLF L++ R
Sbjct: 366 SKGRWSDISVFELVRDPWLPVVYTGIWMMIAGAVCLFALSQKR 408


>UniRef50_Q54B47 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 569

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 15/67 (22%), Positives = 36/67 (53%)
 Frame = +1

Query: 244 FECCNASFFKRCLKRVHKAVAVPITNTHEQR*PRAI*SSTFEDNNNKNHRRNFKSLYSFA 423
           ++  N++FFK+ +     + +   TN+   +  +   +     NNNKN++ N K++ S +
Sbjct: 101 YDSINSTFFKKMIYSGESSSSSTSTNSSNNKSNKNNNNKNNNKNNNKNNKNNNKNIISSS 160

Query: 424 KLQKHVV 444
            ++K ++
Sbjct: 161 PIKKPIL 167


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,629,374
Number of Sequences: 1657284
Number of extensions: 12122431
Number of successful extensions: 22825
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22793
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)