Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2194
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.6  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   4.6  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   4.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 371 IIITKITGVILNPFTHSQSCKNMLFP 448
           +II   T +I  PF+H   C N L P
Sbjct: 683 LIIHVGTQLIYRPFSHFPRCGNHLPP 708


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 244 FECCNASFFKRCLKRVHKAV 303
           FE  N  +FK+C+  V K +
Sbjct: 130 FEDINMDYFKKCIDPVDKVL 149


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 244 FECCNASFFKRCLKRVHKAV 303
           FE  N  +FK+C+  V K +
Sbjct: 130 FEDINMDYFKKCIDPVDKVL 149


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 665 ILV*KYR*YYVVGCGC 618
           +++  Y+   VVGCGC
Sbjct: 356 VILKNYKEMVVVGCGC 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,940
Number of Sequences: 336
Number of extensions: 3548
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)